D. rerio Gene: si:ch211-254p10.2 - ENSDARG00000056750 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056750
Namesi:ch211-254p10.2
Descriptionsi:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
OrganismDanio rerio (zebrafish)
Orthologs(s)8 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.48
  • 79.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
68.20
  • 68.20
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.16e4
  • 1.16e4
61.25
  • 61.25
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.53e4
  • 1.53e4
48.75
  • 48.75
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.63e4
  • 1.63e4
45.58
  • 45.58
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.74e4
  • 1.74e4
41.83
  • 41.83
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.89e4
  • 1.89e4
  • 1.91e4
  • 2.15e4
36.77
  • 36.77
  • 35.97
  • 27.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.04e4
  • 2.04e4
  • 2.08e4
31.62
  • 31.62
  • 30.22
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.37
  • 30.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.51e4
  • 2.51e4
15.89
  • 15.89
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000056750.

Cross-references

EnsemblENSDARG00000056750 (si:ch211-254p10.2)
ZFINZDB-GENE-100922-17 (si:ch211-254p10.2)
EMBLCR391912
Uniprot/SPTREMBLF1QCP0, F1QCP0_DANRE, F1QST3, F1QST3_DANRE

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