D. rerio Gene: ARL3 (1 to many) - ENSDARG00000056794 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056794
NameARL3 (1 to many)
Descriptionzgc:110197 [Source:ZFIN;Acc:ZDB-GENE-050417-368]
OrganismDanio rerio (zebrafish)
Synonym(s)arfl3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
2.20e3
  • 2.20e3
  • 5.43e3
  • 9.13e3
  • 9.96e3
  • 1.07e4
92.65
  • 92.65
  • 81.81
  • 69.43
  • 66.66
  • 64.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.61e3
  • 3.61e3
87.93
  • 87.93
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.54e3
  • 8.54e3
71.40
  • 71.40
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
8.91e3
  • 8.91e3
  • 9.73e3
70.18
  • 70.18
  • 67.41
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.38e3
  • 9.38e3
  • 1.04e4
68.61
  • 68.61
  • 65.19
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.10e4
  • 1.10e4
  • 1.33e4
63.30
  • 63.30
  • 55.30
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.86
  • 61.86
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.26e4
  • 1.26e4
57.76
  • 57.76
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.45
  • 56.45
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.34e4
  • 1.34e4
  • 1.38e4
55.01
  • 55.01
  • 53.65
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.38e4
  • 1.38e4
  • 1.46e4
  • 1.55e4
  • 1.59e4
  • 1.79e4
53.86
  • 53.86
  • 51.13
  • 48.12
  • 46.83
  • 40.08
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 2.03e4
52.27
  • 52.27
  • 32.00
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.44e4
  • 1.44e4
51.80
  • 51.80
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.22
  • 51.22
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.11
  • 49.11
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.11
  • 44.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.41
  • 40.41
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.81e4
  • 1.81e4
39.44
  • 39.44
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.43
  • 37.43
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.28
  • 37.28
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.19
  • 37.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.52
  • 36.52
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.04e4
  • 2.04e4
31.73
  • 31.73
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC092789, BC165524, CR792443, FO082778
EnsemblENSDARG00000056794 (ARL3 (1 to many))
HGNCHGNC:694 (ARL3 (1 to many))
Uniprot/SPTREMBLE7F7G0, E7F7G0_DANRE, Q568N2, Q568N2_DANRE
ZFINZDB-GENE-050417-368 (zgc:110197)

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