D. rerio Gene: ap4m1 - ENSDARG00000056871 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056871
Nameap4m1
Descriptionadaptor-related protein complex 4, mu 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-421]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-237l4.1, zgc:91931

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000027Segmentation:20-25 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
6.40e3
  • 6.40e3
  • 8.30e3
  • 8.40e3
  • 8.79e3
  • 8.96e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.51e3
  • 9.67e3
  • 9.96e3
  • 9.96e3
  • 9.97e3
  • 1.02e4
  • 1.02e4
  • 1.10e4
  • 1.10e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
  • 1.15e4
  • 1.17e4
  • 1.21e4
  • 1.22e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
  • 1.46e4
  • 1.48e4
78.56
  • 78.56
  • 72.21
  • 71.86
  • 70.58
  • 69.99
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 68.17
  • 67.63
  • 66.66
  • 66.66
  • 66.60
  • 65.91
  • 65.72
  • 63.32
  • 63.32
  • 62.67
  • 62.28
  • 62.23
  • 61.50
  • 60.94
  • 59.59
  • 59.10
  • 58.84
  • 58.27
  • 57.98
  • 57.61
  • 51.12
  • 50.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
6.56e3
  • 6.56e3
  • 1.47e4
78.04
  • 78.04
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.60e3
  • 7.60e3
74.55
  • 74.55
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
8.48e3
  • 8.48e3
  • 1.22e4
  • 1.49e4
71.59
  • 71.59
  • 59.14
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.81e3
  • 8.81e3
70.50
  • 70.50
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.84e3
  • 8.84e3
70.41
  • 70.41
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.91e3
  • 8.91e3
70.18
  • 70.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
70.00
  • 70.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
9.70e3
  • 9.70e3
  • 1.01e4
  • 1.14e4
  • 1.17e4
  • 1.18e4
  • 1.19e4
67.52
  • 67.52
  • 66.17
  • 61.99
  • 60.73
  • 60.50
  • 60.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.79e3
  • 9.79e3
67.22
  • 67.22
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
1.02e4
  • 1.02e4
  • 1.28e4
  • 1.30e4
  • 1.49e4
65.90
  • 65.90
  • 57.26
  • 56.56
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
  • 1.06e4
65.69
  • 65.69
  • 64.60
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.95
  • 63.95
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.68
  • 63.68
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.12e4
  • 1.12e4
62.49
  • 62.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
1.12e4
  • 1.12e4
  • 1.13e4
  • 1.18e4
  • 1.18e4
  • 1.18e4
  • 1.24e4
  • 1.25e4
  • 1.37e4
  • 1.41e4
  • 1.42e4
62.36
  • 62.36
  • 62.01
  • 60.37
  • 60.35
  • 60.33
  • 58.59
  • 58.04
  • 54.01
  • 52.65
  • 52.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.99
  • 61.99
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
1.14e4
  • 1.14e4
  • 1.14e4
  • 1.17e4
61.97
  • 61.97
  • 61.88
  • 60.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.71
  • 61.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.45
  • 61.45
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.11
  • 61.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.10
  • 60.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.24e4
  • 1.24e4
58.45
  • 58.45
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
  • 1.70e4
58.26
  • 58.26
  • 42.97
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
  • 1.40e4
  • 1.45e4
56.55
  • 56.55
  • 53.27
  • 51.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
  • 1.33e4
56.00
  • 56.00
  • 55.33
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.34e4
  • 1.34e4
55.27
  • 55.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLAL807389, BC076478, BC165199
EnsemblENSDARG00000056871 (ap4m1)
Uniprot/SPTREMBLQ7SZZ7, Q7SZZ7_DANRE
ZFINZDB-GENE-040718-421 (ap4m1)

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