D. rerio Gene: si:rp71-45g20.10 - ENSDARG00000056907 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056907
Namesi:rp71-45g20.10
Descriptionsi:rp71-45g20.10 [Source:ZFIN;Acc:ZDB-GENE-070912-707]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.87
  • 80.87
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.12e4
  • 1.12e4
62.55
  • 62.55
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
1.27e4
  • 1.27e4
  • 1.67e4
  • 1.79e4
  • 1.94e4
  • 2.03e4
57.34
  • 57.34
  • 44.10
  • 39.94
  • 35.04
  • 32.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.54
  • 54.54
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.77
  • 53.77
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.45e4
  • 1.45e4
  • 1.48e4
51.51
  • 51.51
  • 50.30
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.42
  • 45.42
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.65e4
  • 1.65e4
44.87
  • 44.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.10
  • 39.10
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.78
  • 35.78
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.92e4
  • 1.92e4
  • 2.55e4
35.63
  • 35.63
  • 14.47
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.27
  • 34.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.41
  • 30.41
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
28.88
  • 28.88
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.23e4
  • 2.23e4
25.36
  • 25.36
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.77
  • 24.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.44
  • 22.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBX511265
EnsemblENSDARG00000056907 (si:rp71-45g20.10)
Uniprot/SPTREMBLA8WHX5, A8WHX5_DANRE, A8WHX6, A8WHX6_DANRE
ZFINZDB-GENE-070912-707 (si:rp71-45g20.10)

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