D. rerio Gene: si:rp71-45g20.4 - ENSDARG00000056917 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056917
Namesi:rp71-45g20.4
Descriptionsi:rp71-45g20.4 [Source:ZFIN;Acc:ZDB-GENE-070912-709]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.54e3
  • 3.54e3
88.14
  • 88.14
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.22e4
  • 1.22e4
59.11
  • 59.11
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.21
  • 55.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.74
  • 50.74
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
  • 2.02e4
49.52
  • 49.52
  • 32.26
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.68
  • 47.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.91
  • 46.91
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.61e4
  • 1.61e4
  • 1.97e4
46.24
  • 46.24
  • 34.20
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.51
  • 44.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.07
  • 42.07
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
  • 1.89e4
41.91
  • 41.91
  • 36.86
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.79e4
  • 1.79e4
  • 2.10e4
39.98
  • 39.98
  • 29.53
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.86e4
  • 1.86e4
  • 1.86e4
  • 1.87e4
  • 1.99e4
37.88
  • 37.88
  • 37.66
  • 37.35
  • 33.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.92
  • 34.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.13
  • 33.13
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.77
  • 32.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.73
  • 28.73
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.69
  • 27.69
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.17
  • 26.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC152201, BX511265
EnsemblENSDARG00000056917 (si:rp71-45g20.4)
Uniprot/SPTREMBLA7MCJ1, A7MCJ1_DANRE, A8WHX4, A8WHX4_DANRE, E9QCK1, E9QCK1_DANRE
ZFINZDB-GENE-070912-709 (si:rp71-45g20.4)

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