D. rerio Gene: kdm6bb - ENSDARG00000056929 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056929
Namekdm6bb
Descriptionlysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qq03, jmjd3, kdm6b, si:ch211-237l4.7, zc237l4.7

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
947
  • 947
96.83
  • 96.83
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.26e3
  • 1.26e3
  • 5.24e3
  • 6.45e3
  • 8.27e3
  • 1.37e4
95.78
  • 95.78
  • 82.44
  • 78.41
  • 72.30
  • 54.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.19
  • 86.19
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
  • 5.55e3
84.40
  • 84.40
  • 81.42
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.28e3
  • 6.28e3
  • 8.92e3
78.98
  • 78.98
  • 70.14
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.87e3
  • 7.87e3
73.63
  • 73.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.25
  • 73.25
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.09e3
  • 8.09e3
  • 9.14e3
72.93
  • 72.93
  • 69.39
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.98
  • 70.98
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.34
  • 67.34
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.90e3
  • 9.90e3
66.85
  • 66.85
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.11
  • 64.11
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.18
  • 63.18
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.90
  • 62.90
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.22
  • 56.22
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.50e4
55.16
  • 55.16
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.05
  • 52.05
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.51e4
  • 1.51e4
49.44
  • 49.44
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.51
  • 47.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.69
  • 46.69
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.69e4
  • 1.69e4
43.37
  • 43.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.23
  • 38.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000056929 (kdm6bb)
ZFINZDB-GENE-040724-166 (kdm6bb)
EMBLAL807389
Uniprot/SPTREMBLE9QG91, E9QG91_DANRE

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