D. rerio Gene: kera - ENSDARG00000056938 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056938
Namekera
Descriptionkeratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkeyp-38g8.3, zgc:136259
Orthologs(s)19 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
804
  • 804
  • 1.73e3
97.31
  • 97.31
  • 94.21
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
2.68e3
  • 2.68e3
  • 3.03e3
  • 3.45e3
  • 3.87e3
  • 5.71e3
  • 7.03e3
  • 1.07e4
  • 1.62e4
  • 1.75e4
91.04
  • 91.04
  • 89.87
  • 88.44
  • 87.04
  • 80.88
  • 76.46
  • 64.18
  • 45.63
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.37e3
  • 4.37e3
85.36
  • 85.36
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.38e3
  • 6.38e3
  • 9.84e3
  • 1.09e4
78.62
  • 78.62
  • 67.05
  • 63.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
  • 2.14e4
72.33
  • 72.33
  • 28.20
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.55
  • 71.55
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
9.67e3
  • 9.67e3
  • 1.05e4
  • 1.14e4
  • 1.21e4
  • 1.27e4
  • 1.27e4
  • 1.28e4
67.63
  • 67.63
  • 64.69
  • 61.75
  • 59.36
  • 57.47
  • 57.47
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
1.08e4
  • 1.08e4
  • 1.09e4
  • 1.32e4
  • 1.37e4
  • 1.56e4
  • 1.60e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.84e4
63.83
  • 63.83
  • 63.35
  • 55.82
  • 54.23
  • 47.61
  • 46.46
  • 40.58
  • 40.52
  • 40.35
  • 40.32
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.65
  • 56.65
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.65
  • 56.65
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.65
  • 56.65
AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0002028hindbrain
  • ZFS:0000033Hatching:Long-pec
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.48e4
  • 1.48e4
  • 1.75e4
  • 1.75e4
50.44
  • 50.44
  • 41.52
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005427corneal primordium
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.75
  • 48.75
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.55e4
  • 1.55e4
48.08
  • 48.08
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.66e4
  • 1.66e4
44.42
  • 44.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.92
  • 43.92
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.45
  • 33.45
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.31e4
  • 2.31e4
22.52
  • 22.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000056938.

Cross-references

EnsemblENSDARG00000056938 (kera)
ZFINZDB-GENE-041210-165 (kera)
EMBLBC115058, BX322608
Uniprot/SPTREMBLQ5RI43, Q5RI43_DANRE, Q5RI47, Q5RI47_DANRE

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