D. rerio Gene: epyc - ENSDARG00000056950 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000056950
Nameepyc
Descriptionepiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
OrganismDanio rerio (zebrafish)
Synonym(s)dspg3, dspg3l, im:6901189, si:dkeyp-38g8.4, wu:fb48c08, zgc:110596
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
504
  • 504
  • 908
  • 2.71e3
  • 3.79e3
  • 7.70e3
98.32
  • 98.32
  • 96.96
  • 90.93
  • 87.30
  • 74.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
978
  • 978
  • 1.12e3
96.73
  • 96.73
  • 96.24
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.99e3
  • 4.99e3
  • 1.66e4
83.30
  • 83.30
  • 44.41
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.12e3
  • 6.12e3
79.52
  • 79.52
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.64e3
  • 6.64e3
  • 1.58e4
77.78
  • 77.78
  • 47.20
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.73e3
  • 6.73e3
  • 1.11e4
77.48
  • 77.48
  • 62.76
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
6.89e3
  • 6.89e3
  • 7.47e3
  • 9.71e3
  • 1.12e4
  • 1.14e4
76.92
  • 76.92
  • 74.99
  • 67.48
  • 62.48
  • 61.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000036Larval:Day 4
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
  • 1.15e4
75.00
  • 75.00
  • 61.34
AEIR
  • AEIR
  • AEIR
UBERON:0007390pectoral appendage cartilage tissue
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000033Hatching:Long-pec
7.47e3
  • 7.47e3
  • 1.12e4
75.00
  • 75.00
  • 62.49
AEIR
  • AEIR
  • AEIR
UBERON:0008895splanchnocranium
  • ZFS:0000037Larval:Day 5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.96e3
  • 8.96e3
  • 1.49e4
  • 1.49e4
70.00
  • 70.00
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005945neurocranial trabecula
  • ZFS:0000033Hatching:Long-pec
9.96e3
  • 9.96e3
66.67
  • 66.67
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
  • 1.10e4
  • 1.22e4
  • 1.24e4
  • 1.29e4
  • 1.44e4
  • 1.50e4
66.65
  • 66.65
  • 63.32
  • 59.08
  • 58.32
  • 56.79
  • 51.82
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.76
  • 60.76
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.21e4
  • 1.21e4
  • 1.75e4
59.59
  • 59.59
  • 41.46
AEIR
  • AEIR
  • AEIR
CL:0000138chondrocyte
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.63e4
  • 1.63e4
45.53
  • 45.53
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.66
  • 39.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.63
  • 39.63
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.13
  • 38.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
37.98
  • 37.98
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.46
  • 36.46
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.85
  • 35.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.12
  • 33.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.96
  • 30.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

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