D. rerio Gene: c6 - ENSDARG00000057113 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057113
Namec6
Descriptioncomplement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:64073
Orthologs(s)18 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
133
  • 133
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
156
  • 156
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
648
  • 648
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
867
  • 867
  • 3.28e3
97.10
  • 97.10
  • 89.03
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
990
  • 990
96.69
  • 96.69
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.29e3
  • 1.29e3
  • 8.70e3
95.69
  • 95.69
  • 70.86
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.97e3
  • 1.97e3
93.42
  • 93.42
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.62
  • 92.62
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.06
  • 90.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.37e3
  • 3.37e3
88.70
  • 88.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.83e3
  • 3.83e3
87.17
  • 87.17
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.06e3
  • 4.06e3
86.42
  • 86.42
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
4.74e3
  • 4.74e3
  • 4.81e3
  • 5.15e3
  • 9.13e3
  • 1.01e4
  • 1.02e4
  • 1.06e4
  • 1.43e4
  • 1.45e4
84.14
  • 84.14
  • 83.89
  • 82.77
  • 69.44
  • 66.28
  • 65.82
  • 64.47
  • 52.01
  • 51.43
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.11
  • 83.11
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.52e3
  • 5.52e3
81.52
  • 81.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.09e3
  • 7.09e3
76.26
  • 76.26
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.28e3
  • 8.28e3
  • 1.05e4
  • 1.38e4
72.27
  • 72.27
  • 64.85
  • 53.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
8.70e3
  • 8.70e3
  • 9.68e3
  • 9.96e3
  • 1.11e4
  • 1.23e4
  • 1.75e4
70.85
  • 70.85
  • 67.59
  • 66.65
  • 62.75
  • 58.72
  • 41.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.90e3
  • 8.90e3
  • 9.94e3
70.21
  • 70.21
  • 66.72
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.25e3
  • 9.25e3
69.02
  • 69.02
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
1.14e4
  • 1.14e4
  • 1.15e4
  • 1.23e4
  • 1.27e4
  • 1.35e4
  • 1.40e4
  • 1.43e4
  • 1.50e4
  • 1.53e4
  • 1.53e4
  • 1.54e4
  • 1.54e4
  • 1.56e4
  • 1.61e4
61.82
  • 61.82
  • 61.38
  • 58.66
  • 57.63
  • 54.76
  • 53.20
  • 51.99
  • 49.92
  • 48.76
  • 48.68
  • 48.54
  • 48.42
  • 47.93
  • 46.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.29e4
  • 1.29e4
56.84
  • 56.84
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.31e4
  • 1.31e4
55.98
  • 55.98
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.04
  • 52.04
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.50e4
  • 1.50e4
  • 1.80e4
49.80
  • 49.80
  • 39.73
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000057113.

Cross-references

EnsemblENSDARG00000057113 (c6)
ZFINZDB-GENE-040426-1358 (c6)
EMBLBC057429, BC164035, BX511186
Uniprot/SPTREMBLE9QB99, E9QB99_DANRE, Q6PFT2, Q6PFT2_DANRE

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