D. rerio Gene: zmynd11 - ENSDARG00000057249 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057249
Namezmynd11
Descriptionzinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]
OrganismDanio rerio (zebrafish)
Synonym(s)bram1, bs69, wu:fi38d06, zgc:110370, zgc:152745

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:00072322 cell stage
  • ZFS:0000012Blastula:High
912
  • 912
  • 2.01e3
  • 3.12e3
  • 3.26e3
  • 3.30e3
  • 3.36e3
  • 3.48e3
  • 3.62e3
  • 4.77e3
  • 4.95e3
  • 5.00e3
  • 5.15e3
  • 5.37e3
  • 6.47e3
  • 6.79e3
  • 6.79e3
96.95
  • 96.95
  • 93.26
  • 89.57
  • 89.08
  • 88.96
  • 88.77
  • 88.35
  • 87.89
  • 84.04
  • 83.42
  • 83.27
  • 82.76
  • 82.01
  • 78.34
  • 77.27
  • 77.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
961
  • 961
96.78
  • 96.78
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
977
  • 977
  • 1.07e3
  • 1.15e3
  • 3.01e3
  • 4.07e3
96.73
  • 96.73
  • 96.41
  • 96.15
  • 89.94
  • 86.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.22e3
  • 1.22e3
95.93
  • 95.93
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.21
  • 95.21
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
95.11
  • 95.11
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.54e3
  • 1.54e3
94.86
  • 94.86
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.55e3
  • 1.55e3
94.81
  • 94.81
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.60e3
  • 1.60e3
94.63
  • 94.63
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.17
  • 94.17
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.87e3
  • 1.87e3
93.73
  • 93.73
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
1.89e3
  • 1.89e3
  • 2.19e3
  • 2.65e3
  • 2.65e3
  • 2.95e3
  • 3.60e3
  • 3.81e3
  • 3.96e3
  • 5.03e3
  • 5.30e3
93.66
  • 93.66
  • 92.66
  • 91.14
  • 91.14
  • 90.11
  • 87.95
  • 87.26
  • 86.75
  • 83.16
  • 82.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000028Segmentation:26+ somites
1.90e3
  • 1.90e3
  • 3.52e3
  • 1.31e4
  • 1.49e4
  • 1.49e4
93.63
  • 93.63
  • 88.23
  • 56.24
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000030Pharyngula:Prim-15
2.01e3
  • 2.01e3
  • 2.36e3
  • 2.40e3
  • 2.84e3
  • 1.30e4
93.27
  • 93.27
  • 92.11
  • 91.95
  • 90.50
  • 56.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.03e3
  • 2.03e3
  • 2.64e3
93.22
  • 93.22
  • 91.16
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
  • 2.58e3
92.68
  • 92.68
  • 91.36
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.43e3
  • 2.43e3
91.86
  • 91.86
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.32
  • 91.32
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.69e3
  • 2.69e3
91.01
  • 91.01
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.00e3
  • 3.00e3
  • 3.05e3
  • 3.27e3
89.96
  • 89.96
  • 89.78
  • 89.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.02e3
  • 3.02e3
89.90
  • 89.90
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.03e3
  • 3.03e3
89.85
  • 89.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.25e3
  • 3.25e3
89.13
  • 89.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
3.64e3
  • 3.64e3
87.82
  • 87.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.78e3
  • 3.78e3
87.33
  • 87.33
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
4.58e3
  • 4.58e3
  • 5.05e3
  • 5.45e3
  • 5.68e3
  • 5.90e3
  • 6.57e3
84.67
  • 84.67
  • 83.08
  • 81.75
  • 80.99
  • 80.26
  • 78.02
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.29
  • 84.29
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.12e3
  • 7.12e3
76.17
  • 76.17
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000030Pharyngula:Prim-15
1.20e4
  • 1.20e4
59.98
  • 59.98
AEIR
  • AEIR
UBERON:0010312immature eye
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000025Segmentation:10-13 somites
1.41e4
  • 1.41e4
  • 1.49e4
52.92
  • 52.92
  • 50.00
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX571689
EnsemblENSDARG00000057249 (zmynd11)
Uniprot/SPTREMBLF1R4W7, F1R4W7_DANRE
ZFINZDB-GENE-050522-301 (zmynd11)

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