D. rerio Gene: alox5a - ENSDARG00000057273 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057273
Namealox5a
Descriptionarachidonate 5-lipoxygenase a [Source:ZFIN;Acc:ZDB-GENE-090311-47]
OrganismDanio rerio (zebrafish)
Synonym(s)alox5, lox2, si:dkey-194n13.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.57e3
  • 1.57e3
94.74
  • 94.74
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.64e3
  • 6.64e3
77.77
  • 77.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000011Blastula:1k-cell
6.79e3
  • 6.79e3
77.27
  • 77.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.79e3
  • 7.79e3
73.92
  • 73.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.30e3
  • 9.30e3
68.85
  • 68.85
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.91
  • 64.91
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
1.24e4
  • 1.24e4
  • 1.31e4
  • 1.50e4
  • 1.52e4
  • 2.16e4
58.64
  • 58.64
  • 56.11
  • 49.70
  • 49.14
  • 27.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.90
  • 56.90
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.78
  • 53.78
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.09
  • 53.09
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.41e4
  • 1.41e4
52.80
  • 52.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.62
  • 52.62
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
48.94
  • 48.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.88
  • 45.88
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 2.17e4
45.85
  • 45.85
  • 27.30
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.16
  • 42.16
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.76e4
  • 1.76e4
40.94
  • 40.94
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.69
  • 40.69
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.78e4
  • 1.78e4
  • 1.82e4
40.39
  • 40.39
  • 39.10
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.56
  • 35.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX927098, CU012047
EnsemblENSDARG00000057273 (alox5a)
Uniprot/SPTREMBLB8A697, B8A697_DANRE
ZFINZDB-GENE-090311-47 (alox5a)

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