D. rerio Gene: nexn - ENSDARG00000057317 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057317
Namenexn
Descriptionnexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:103442
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
473
  • 473
  • 485
  • 8.96e3
  • 9.44e3
98.42
  • 98.42
  • 98.38
  • 69.99
  • 68.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
584
  • 584
98.05
  • 98.05
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
669
  • 669
97.76
  • 97.76
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
832
  • 832
  • 2.40e3
  • 2.89e3
  • 1.24e4
97.22
  • 97.22
  • 91.97
  • 90.34
  • 58.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
936
  • 936
  • 991
  • 1.24e3
  • 2.01e3
  • 2.13e3
  • 3.42e3
  • 3.98e3
  • 6.01e3
  • 1.04e4
  • 1.15e4
96.87
  • 96.87
  • 96.68
  • 95.84
  • 93.27
  • 92.89
  • 88.56
  • 86.66
  • 79.89
  • 65.02
  • 61.55
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.20e3
  • 1.20e3
95.99
  • 95.99
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.46e3
  • 1.46e3
95.13
  • 95.13
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.85e3
  • 1.85e3
93.79
  • 93.79
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
  • ZFS:0000019Gastrula:Shield
2.19e3
  • 2.19e3
  • 3.10e3
  • 3.40e3
  • 5.39e3
  • 5.93e3
  • 6.15e3
  • 6.25e3
  • 7.53e3
  • 1.20e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
  • 1.52e4
92.67
  • 92.67
  • 89.62
  • 88.60
  • 81.95
  • 80.16
  • 79.40
  • 79.08
  • 74.78
  • 59.86
  • 50.23
  • 50.20
  • 49.92
  • 49.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
2.69e3
  • 2.69e3
91.00
  • 91.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
3.77e3
  • 3.77e3
  • 4.71e3
  • 5.75e3
87.39
  • 87.39
  • 84.23
  • 80.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
5.33e3
  • 5.33e3
  • 1.08e4
  • 1.37e4
82.17
  • 82.17
  • 63.76
  • 54.13
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.47
  • 78.47
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
  • 1.28e4
78.20
  • 78.20
  • 57.08
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
7.16e3
  • 7.16e3
76.01
  • 76.01
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.35e3
  • 7.35e3
75.38
  • 75.38
AEIR
  • AEIR
UBERON:0003895hypaxial myotome region
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.30e3
  • 8.30e3
  • 8.30e3
72.22
  • 72.22
  • 72.22
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.54e3
  • 8.54e3
71.42
  • 71.42
AEIR
  • AEIR
UBERON:0007269pectoral appendage musculature
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
8.65e3
  • 8.65e3
  • 8.65e3
71.04
  • 71.04
  • 71.04
AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000032Pharyngula:High-pec
8.96e3
  • 8.96e3
  • 9.96e3
  • 1.02e4
  • 1.05e4
  • 1.08e4
  • 1.08e4
  • 1.08e4
69.98
  • 69.98
  • 66.65
  • 65.77
  • 64.98
  • 63.87
  • 63.87
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.55e3
  • 9.55e3
68.03
  • 68.03
AEIR
  • AEIR
UBERON:0004291heart rudiment
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
9.96e3
  • 9.96e3
  • 1.03e4
  • 1.08e4
66.65
  • 66.65
  • 65.37
  • 63.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.46
  • 65.46
AEIR
  • AEIR
UBERON:0003084heart primordium
  • ZFS:0000026Segmentation:14-19 somites
1.05e4
  • 1.05e4
64.69
  • 64.69
AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
1.08e4
  • 1.08e4
  • 1.12e4
  • 1.19e4
63.87
  • 63.87
  • 62.48
  • 59.99
AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.08e4
  • 1.08e4
  • 1.14e4
  • 1.16e4
63.87
  • 63.87
  • 61.75
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.19
  • 63.19
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.15e4
  • 1.15e4
61.37
  • 61.37
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.03
  • 59.03
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.30e4
  • 1.30e4
56.48
  • 56.48
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.60e4
  • 1.60e4
  • 1.75e4
46.26
  • 46.26
  • 41.42
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000057317 (nexn)
ZFINZDB-GENE-041114-92 (nexn)
EMBLAL844185, BC085519
Uniprot/SPTREMBLE7F4H3, E7F4H3_DANRE, F1QGT0, F1QGT0_DANRE, F8W277, F8W277_DANRE, F8W2U9, F8W2U9_DANRE, Q5U3J5, Q5U3J5_DANRE

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