D. rerio Gene: tut1 - ENSDARG00000057321 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057321
Nametut1
Descriptionterminal uridylyl transferase 1, U6 snRNA-specific [Source:ZFIN;Acc:ZDB-GENE-050706-68]
OrganismDanio rerio (zebrafish)
Synonym(s)u6 tutase, zgc:112254

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.94e3
  • 2.94e3
  • 5.16e3
  • 5.20e3
  • 5.42e3
  • 7.83e3
90.16
  • 90.16
  • 82.74
  • 82.58
  • 81.86
  • 73.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.12e3
  • 3.12e3
  • 4.61e3
  • 5.26e3
  • 5.37e3
  • 6.79e3
  • 9.57e3
89.54
  • 89.54
  • 84.56
  • 82.37
  • 82.02
  • 77.27
  • 67.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
  • 8.26e3
  • 9.96e3
85.93
  • 85.93
  • 72.35
  • 66.64
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.27e3
  • 4.27e3
85.70
  • 85.70
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.67e3
  • 4.67e3
84.38
  • 84.38
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.20e3
  • 5.20e3
  • 1.50e4
82.59
  • 82.59
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.31e3
  • 6.31e3
78.87
  • 78.87
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
78.68
  • 78.68
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
6.52e3
  • 6.52e3
  • 7.88e3
  • 8.17e3
  • 8.18e3
  • 8.24e3
  • 8.59e3
  • 9.92e3
  • 1.02e4
  • 1.04e4
  • 1.07e4
  • 1.12e4
  • 1.21e4
  • 1.34e4
  • 1.39e4
  • 1.49e4
78.18
  • 78.18
  • 73.60
  • 72.63
  • 72.62
  • 72.40
  • 71.24
  • 66.77
  • 65.88
  • 65.33
  • 64.32
  • 62.43
  • 59.55
  • 55.04
  • 53.40
  • 50.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.53e3
  • 6.53e3
  • 6.86e3
  • 7.16e3
  • 8.08e3
  • 8.53e3
  • 8.85e3
  • 8.94e3
  • 1.25e4
  • 1.40e4
  • 1.52e4
78.14
  • 78.14
  • 77.02
  • 76.03
  • 72.95
  • 71.42
  • 70.37
  • 70.06
  • 58.27
  • 53.03
  • 48.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
7.21e3
  • 7.21e3
75.85
  • 75.85
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.56e3
  • 7.56e3
74.69
  • 74.69
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.01e3
  • 8.01e3
73.17
  • 73.17
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.81
  • 72.81
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
  • 1.25e4
69.95
  • 69.95
  • 58.12
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.04e3
  • 9.04e3
69.75
  • 69.75
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.25
  • 67.25
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.99
  • 63.99
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.50e4
63.84
  • 63.84
  • 49.61
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.12
  • 63.12
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.92
  • 61.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.80
  • 61.80
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.64
  • 61.64
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.79
  • 59.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.74
  • 57.74
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
  • 1.27e4
57.65
  • 57.65
  • 57.64
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.45
  • 57.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.31e4
  • 1.31e4
  • 1.33e4
  • 1.42e4
56.25
  • 56.25
  • 55.45
  • 52.38
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.80e4
56.18
  • 56.18
  • 39.80
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.10
  • 56.10
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.17
  • 54.17
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCR848037
EnsemblENSDARG00000057321 (tut1)
Uniprot/SPTREMBLF1QGS3, F1QGS3_DANRE
ZFINZDB-GENE-050706-68 (tut1)

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