D. rerio Gene: si:ch211-209j10.5 - ENSDARG00000057403 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057403
Namesi:ch211-209j10.5
Descriptionsi:ch211-209j10.5 [Source:ZFIN;Acc:ZDB-GENE-090313-80]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
979
  • 979
96.73
  • 96.73
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
2.72e3
  • 2.72e3
  • 3.03e3
  • 3.23e3
  • 3.98e3
  • 5.22e3
90.90
  • 90.90
  • 89.86
  • 89.18
  • 86.68
  • 82.53
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.76e3
  • 2.76e3
90.76
  • 90.76
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.17e3
  • 3.17e3
  • 6.17e3
89.40
  • 89.40
  • 79.35
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
3.74e3
  • 3.74e3
  • 8.12e3
87.48
  • 87.48
  • 72.81
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
4.23e3
  • 4.23e3
  • 1.07e4
85.85
  • 85.85
  • 64.30
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.75e3
  • 4.75e3
84.08
  • 84.08
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.27
  • 79.27
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.55e3
  • 7.55e3
  • 8.06e3
74.73
  • 74.73
  • 73.00
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.00e3
  • 8.00e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
8.06e3
  • 8.06e3
73.02
  • 73.02
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.73
  • 72.73
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.62
  • 72.62
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.66
  • 71.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.92
  • 69.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
68.70
  • 68.70
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.00
  • 61.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.69
  • 57.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.49
  • 56.49
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.30
  • 49.30
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.58
  • 48.58
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.53
  • 38.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.81
  • 35.81
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.14e4
  • 2.14e4
28.30
  • 28.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000057403 (si:ch211-209j10.5)
ZFINZDB-GENE-090313-80 (si:ch211-209j10.5)

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