D. rerio Gene: amacr - ENSDARG00000057435 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057435
Nameamacr
Descriptionalpha-methylacyl-CoA racemase [Source:ZFIN;Acc:ZDB-GENE-050522-484]
OrganismDanio rerio (zebrafish)
Synonym(s)c1qtnf3, zgc:110704

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.98e3
  • 2.98e3
90.02
  • 90.02
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
82.53
  • 82.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.48
  • 82.48
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
6.18e3
  • 6.18e3
79.31
  • 79.31
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.23e3
  • 6.23e3
79.14
  • 79.14
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
6.78e3
  • 6.78e3
  • 7.05e3
77.31
  • 77.31
  • 76.41
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.71
  • 72.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.67e3
  • 8.67e3
70.97
  • 70.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
8.97e3
  • 8.97e3
  • 1.17e4
69.96
  • 69.96
  • 60.70
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
9.27e3
  • 9.27e3
  • 1.70e4
68.97
  • 68.97
  • 43.02
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.45e3
  • 9.45e3
68.37
  • 68.37
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.59
  • 64.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.46
  • 64.46
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.68
  • 62.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.67
  • 62.67
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.60
  • 58.60
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.32e4
  • 1.32e4
  • 1.47e4
55.83
  • 55.83
  • 50.81
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.36
  • 54.36
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.40e4
  • 1.40e4
  • 1.46e4
  • 1.58e4
  • 1.60e4
  • 1.70e4
53.22
  • 53.22
  • 51.23
  • 47.06
  • 46.37
  • 43.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.52
  • 50.52
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.37
  • 50.37
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.56e4
  • 1.56e4
47.88
  • 47.88
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.88e4
  • 1.88e4
  • 1.96e4
37.06
  • 37.06
  • 34.42
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR749169
EnsemblENSDARG00000057435 (amacr)
Uniprot/SPTREMBLF1QDN0, F1QDN0_DANRE
ZFINZDB-GENE-050522-484 (amacr)

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