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D. rerio Gene: RNF157 - ENSDARG00000057481 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057481
NameRNF157
Descriptionsi:dkey-49c17.3 [Source:ZFIN;Acc:ZDB-GENE-130531-49]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa1917, rnf157
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.33e3
  • 1.33e3
95.55
  • 95.55
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
85.93
  • 85.93
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
5.74e3
  • 5.74e3
  • 5.96e3
  • 1.40e4
  • 1.42e4
  • 1.47e4
80.79
  • 80.79
  • 80.03
  • 53.27
  • 52.39
  • 50.84
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.62e3
  • 8.62e3
  • 8.91e3
71.13
  • 71.13
  • 70.16
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.48e3
  • 9.48e3
  • 1.29e4
68.26
  • 68.26
  • 56.83
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
64.24
  • 64.24
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.16e4
  • 1.16e4
  • 1.71e4
61.09
  • 61.09
  • 42.70
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.25e4
  • 1.25e4
  • 1.56e4
58.04
  • 58.04
  • 47.66
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.66e4
  • 1.66e4
44.25
  • 44.25
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.77
  • 42.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.46
  • 42.46
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.19
  • 40.19
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.70
  • 34.70
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.14e4
  • 2.14e4
28.31
  • 28.31
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000057481 (RNF157)
HGNCHGNC:29402 (RNF157)
ZFINZDB-GENE-130531-49 (si:dkey-49c17.3)
EMBLCR352342, CR450698
Uniprot/SPTREMBLE7FBW3, E7FBW3_DANRE

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