D. rerio Gene: habp2 - ENSDARG00000057498 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057498
Namehabp2
Descriptionhyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
OrganismDanio rerio (zebrafish)
Synonym(s)fd56a04, wu:fd56a04, zgc:171352
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000039Larval:Days 7-13
392
  • 392
  • 9.96e3
98.69
  • 98.69
  • 66.67
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.38
  • 93.38
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.70
  • 80.70
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.79e3
  • 5.79e3
  • 1.38e4
80.63
  • 80.63
  • 53.74
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.32e3
  • 6.32e3
78.85
  • 78.85
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.41e3
  • 7.41e3
75.18
  • 75.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.03e4
  • 1.03e4
  • 1.29e4
  • 1.71e4
  • 1.75e4
  • 1.80e4
65.59
  • 65.59
  • 56.97
  • 42.73
  • 41.43
  • 39.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.08e4
  • 1.08e4
  • 1.85e4
63.70
  • 63.70
  • 38.08
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
  • 2.13e4
38.16
  • 38.16
  • 28.68
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.54
  • 30.54
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.20e4
  • 2.20e4
26.45
  • 26.45
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000057498 (habp2)
ZFINZDB-GENE-030131-4721 (habp2)
EMBLCR352342
Uniprot/SPTREMBLE7FC55, E7FC55_DANRE, F1QW52, F1QW52_DANRE

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