D. rerio Gene: pcdh1g9 - ENSDARG00000057519 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057519
Namepcdh1g9
Descriptionprotocadherin 1 gamma 9 [Source:ZFIN;Acc:ZDB-GENE-050609-5]
OrganismDanio rerio (zebrafish)
Synonym(s)drpcdh1g8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
2.00e3
  • 2.00e3
93.31
  • 93.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.77
  • 85.77
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
7.63e3
  • 7.63e3
  • 8.50e3
  • 1.47e4
  • 1.51e4
  • 1.63e4
74.44
  • 74.44
  • 71.54
  • 50.86
  • 49.55
  • 45.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.96e3
  • 8.96e3
  • 1.14e4
70.01
  • 70.01
  • 61.89
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.80e3
  • 9.80e3
67.18
  • 67.18
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.01e4
  • 1.01e4
66.11
  • 66.11
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
  • 1.58e4
53.97
  • 53.97
  • 47.13
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.19
  • 45.19
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.65
  • 41.65
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.84
  • 38.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.63
  • 38.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.60
  • 32.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.50
  • 27.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.37
  • 23.37
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC162461
EnsemblENSDARG00000057519 (pcdh1g9)
Uniprot/SPTREMBLB3DGN6, B3DGN6_DANRE, E7F8C3, E7F8C3_DANRE
ZFINZDB-GENE-050609-5 (pcdh1g9)

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