D. rerio Gene: rpl17 - ENSDARG00000057556 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057556
Namerpl17
Descriptionribosomal protein L17 [Source:ZFIN;Acc:ZDB-GENE-030131-8585]
OrganismDanio rerio (zebrafish)
Synonym(s)fa91a06, wu:fa91a06, wu:fa99c06, zgc:65996

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
38.0
  • 38.0
  • 75.4
  • 86.4
  • 92.7
  • 97.9
  • 103
  • 120
  • 122
  • 297
  • 703
99.88
  • 99.88
  • 99.75
  • 99.71
  • 99.69
  • 99.68
  • 99.66
  • 99.60
  • 99.59
  • 99.01
  • 97.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
54.0
  • 54.0
99.82
  • 99.82
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
55.0
  • 55.0
99.82
  • 99.82
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
55.6
  • 55.6
  • 200
99.82
  • 99.82
  • 99.33
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
59.6
  • 59.6
  • 102
  • 201
  • 203
  • 288
  • 420
99.80
  • 99.80
  • 99.66
  • 99.33
  • 99.32
  • 99.04
  • 98.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
64.0
  • 64.0
99.79
  • 99.79
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
68.0
  • 68.0
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
80.0
  • 80.0
99.74
  • 99.74
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
82.9
  • 82.9
99.73
  • 99.73
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
86.2
  • 86.2
  • 654
99.71
  • 99.71
  • 97.81
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
89.9
  • 89.9
  • 885
99.70
  • 99.70
  • 97.04
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
93.9
  • 93.9
  • 96.6
  • 165
99.69
  • 99.69
  • 99.68
  • 99.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
94.0
  • 94.0
99.69
  • 99.69
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
96.4
  • 96.4
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
111
  • 111
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
114
  • 114
99.62
  • 99.62
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
116
  • 116
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
117
  • 117
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
129
  • 129
99.57
  • 99.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
145
  • 145
  • 447
99.52
  • 99.52
  • 98.51
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
170
  • 170
  • 189
  • 194
  • 201
  • 216
  • 218
  • 231
  • 240
  • 256
  • 282
  • 298
  • 335
  • 612
  • 1.65e3
99.44
  • 99.44
  • 99.37
  • 99.35
  • 99.33
  • 99.28
  • 99.27
  • 99.23
  • 99.20
  • 99.14
  • 99.06
  • 99.01
  • 98.88
  • 97.95
  • 94.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
184
  • 184
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
184
  • 184
99.39
  • 99.39
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
185
  • 185
99.38
  • 99.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
197
  • 197
99.34
  • 99.34
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
199
  • 199
  • 239
  • 460
  • 580
  • 883
99.34
  • 99.34
  • 99.20
  • 98.46
  • 98.06
  • 97.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
208
  • 208
99.31
  • 99.31
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
211
  • 211
99.30
  • 99.30
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
213
  • 213
  • 553
  • 655
  • 908
99.29
  • 99.29
  • 98.15
  • 97.81
  • 96.96
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.03e3
  • 4.03e3
86.51
  • 86.51
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.94e3
  • 4.94e3
83.46
  • 83.46
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.85
  • 82.85
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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