D. rerio Gene: foxj2 - ENSDARG00000057680 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057680
Namefoxj2
Descriptionforkhead box J2 [Source:ZFIN;Acc:ZDB-GENE-100922-240]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-38o19.8

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.71e3
  • 5.71e3
80.89
  • 80.89
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.38
  • 80.38
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.01
  • 80.01
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.25e3
  • 6.25e3
  • 8.43e3
79.08
  • 79.08
  • 71.77
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.26e3
  • 7.26e3
75.69
  • 75.69
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
7.86e3
  • 7.86e3
73.69
  • 73.69
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
8.10e3
  • 8.10e3
72.88
  • 72.88
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
8.58e3
  • 8.58e3
  • 1.34e4
  • 1.40e4
  • 1.42e4
  • 1.42e4
71.27
  • 71.27
  • 55.30
  • 52.97
  • 52.53
  • 52.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.89e3
  • 8.89e3
  • 1.28e4
70.24
  • 70.24
  • 57.23
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.11
  • 69.11
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.29e3
  • 9.29e3
  • 1.71e4
68.89
  • 68.89
  • 42.73
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.70e3
  • 9.70e3
67.53
  • 67.53
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.17
  • 66.17
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.15
  • 66.15
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.32
  • 65.32
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.15e4
  • 1.15e4
  • 1.27e4
61.51
  • 61.51
  • 57.32
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.23e4
  • 1.23e4
58.72
  • 58.72
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.69
  • 55.69
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.44e4
  • 1.44e4
  • 1.65e4
51.62
  • 51.62
  • 44.85
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.96
  • 50.96
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.47
  • 49.47
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.67e4
  • 1.67e4
43.98
  • 43.98
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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