D. rerio Gene: si:ch211-266o15.1 - ENSDARG00000057681 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057681
Namesi:ch211-266o15.1
Descriptionsi:ch211-266o15.1 [Source:ZFIN;Acc:ZDB-GENE-131127-116]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
2.85e3
  • 2.85e3
  • 3.68e3
  • 1.07e4
  • 1.08e4
  • 1.30e4
90.46
  • 90.46
  • 87.68
  • 64.11
  • 63.81
  • 56.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.59
  • 87.59
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
4.05e3
  • 4.05e3
  • 4.40e3
  • 6.03e3
  • 6.54e3
  • 7.57e3
  • 1.07e4
  • 1.11e4
  • 1.26e4
  • 1.37e4
  • 1.45e4
86.44
  • 86.44
  • 85.27
  • 79.81
  • 78.12
  • 74.65
  • 64.02
  • 62.80
  • 57.98
  • 54.22
  • 51.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.76
  • 85.76
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
4.45e3
  • 4.45e3
  • 4.96e3
  • 1.33e4
  • 1.36e4
85.10
  • 85.10
  • 83.40
  • 55.62
  • 54.39
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.72e3
  • 4.72e3
84.20
  • 84.20
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.55e3
  • 5.55e3
81.42
  • 81.42
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
  • 1.09e4
  • 1.10e4
  • 1.19e4
80.68
  • 80.68
  • 63.60
  • 63.28
  • 60.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.78e3
  • 5.78e3
80.66
  • 80.66
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.88e3
  • 5.88e3
80.31
  • 80.31
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
  • 1.14e4
78.67
  • 78.67
  • 61.72
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.60e3
  • 7.60e3
74.57
  • 74.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
8.16e3
  • 8.16e3
72.69
  • 72.69
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.30e3
  • 8.30e3
72.21
  • 72.21
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.35e3
  • 8.35e3
  • 1.15e4
72.05
  • 72.05
  • 61.55
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
9.75e3
  • 9.75e3
67.36
  • 67.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.31
  • 66.31
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.19
  • 66.19
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.72
  • 64.72
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.08e4
  • 1.08e4
  • 1.08e4
  • 1.42e4
63.91
  • 63.91
  • 63.83
  • 52.49
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.59
  • 63.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.58
  • 62.58
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.40
  • 61.40
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.26
  • 61.26
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.20e4
  • 1.20e4
59.75
  • 59.75
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.21e4
  • 1.21e4
59.47
  • 59.47
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.21e4
  • 1.21e4
  • 1.31e4
59.33
  • 59.33
  • 56.00
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.25e4
  • 1.25e4
58.24
  • 58.24
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.96
  • 57.96
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
1.29e4
  • 1.29e4
  • 1.31e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
  • 1.37e4
  • 1.37e4
  • 1.41e4
  • 1.43e4
  • 1.44e4
  • 1.44e4
  • 1.45e4
  • 1.50e4
  • 1.51e4
56.66
  • 56.66
  • 56.22
  • 55.15
  • 54.60
  • 54.53
  • 54.21
  • 54.14
  • 52.76
  • 52.11
  • 51.88
  • 51.82
  • 51.42
  • 49.86
  • 49.36
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.64e4
  • 1.64e4
45.23
  • 45.23
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR774184
EnsemblENSDARG00000057681 (si:ch211-266o15.1)
Uniprot/SPTREMBLE7FA89, E7FA89_DANRE, X1WH87, X1WH87_DANRE
ZFINZDB-GENE-131127-116 (si:ch211-266o15.1)

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