D. rerio Gene: si:ch211-137i24.10 - ENSDARG00000057706 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057706
Namesi:ch211-137i24.10
Descriptionsi:ch211-137i24.10 [Source:ZFIN;Acc:ZDB-GENE-060526-34]
OrganismDanio rerio (zebrafish)
Synonym(s)tm4sf4
Orthologs(s)2 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
368
  • 368
98.77
  • 98.77
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.76e3
  • 1.76e3
94.10
  • 94.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.98e3
  • 2.98e3
  • 6.78e3
  • 9.37e3
90.02
  • 90.02
  • 77.29
  • 68.61
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.76e3
  • 3.76e3
87.41
  • 87.41
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
4.57e3
  • 4.57e3
  • 1.53e4
  • 1.54e4
  • 1.69e4
  • 1.77e4
84.70
  • 84.70
  • 48.66
  • 48.53
  • 43.54
  • 40.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.88e3
  • 4.88e3
83.67
  • 83.67
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.42e3
  • 5.42e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.96e3
  • 5.96e3
80.06
  • 80.06
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
6.08e3
  • 6.08e3
  • 9.78e3
79.66
  • 79.66
  • 67.27
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
7.78e3
  • 7.78e3
  • 8.77e3
  • 1.09e4
  • 1.39e4
  • 1.50e4
  • 1.50e4
  • 1.68e4
  • 1.77e4
  • 1.78e4
  • 1.79e4
73.96
  • 73.96
  • 70.65
  • 63.54
  • 53.45
  • 49.92
  • 49.81
  • 43.90
  • 40.62
  • 40.38
  • 40.18
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.18e3
  • 8.18e3
72.60
  • 72.60
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.65e3
  • 8.65e3
71.03
  • 71.03
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.04e4
  • 1.04e4
  • 1.84e4
65.31
  • 65.31
  • 38.47
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.46
  • 62.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.02
  • 60.02
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.52e4
  • 1.52e4
49.26
  • 49.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.68e4
  • 1.68e4
  • 1.75e4
43.60
  • 43.60
  • 41.42
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.70e4
  • 1.70e4
  • 1.79e4
43.14
  • 43.14
  • 40.03
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.72
  • 41.72
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.85e4
  • 1.85e4
38.08
  • 38.08
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species2 genesCompare expression

Orthology information comes from OMA : ENSDARG00000057706.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Euteleostomi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000057706.

Cross-references

EnsemblENSDARG00000057706 (si:ch211-137i24.10)
ZFINZDB-GENE-060526-34 (si:ch211-137i24.10)
EMBLBX119902
Uniprot/SPTREMBLA2BEN8, A2BEN8_DANRE

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