D. rerio Gene: lyz - ENSDARG00000057789 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057789
Namelyz
Descriptionlysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
OrganismDanio rerio (zebrafish)
Synonym(s)lys c, lys-c, lysozyme c, zgc:136734

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.00
  • 1.00
  • 1.49e4
  • 1.49e4
100.00
  • 100.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
21.0
  • 21.0
99.93
  • 99.93
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
84.0
  • 84.0
99.72
  • 99.72
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
  • ZFS:0000038Larval:Day 6
177
  • 177
  • 1.49e4
99.41
  • 99.41
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
244
  • 244
99.19
  • 99.19
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
292
  • 292
  • 1.24e3
  • 1.30e3
  • 1.86e3
  • 1.98e3
  • 2.62e3
  • 4.83e3
  • 1.50e4
99.03
  • 99.03
  • 95.85
  • 95.65
  • 93.79
  • 93.38
  • 91.23
  • 83.84
  • 49.70
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
701
  • 701
  • 1.35e4
  • 1.49e4
97.66
  • 97.66
  • 54.71
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
830
  • 830
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.10e3
  • 1.10e3
96.32
  • 96.32
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.23e3
  • 1.23e3
95.90
  • 95.90
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
1.49e3
  • 1.49e3
  • 2.48e3
  • 3.40e3
  • 3.60e3
  • 3.69e3
  • 9.26e3
  • 1.04e4
  • 1.36e4
  • 1.36e4
  • 1.38e4
  • 1.50e4
  • 1.50e4
  • 1.50e4
95.00
  • 95.00
  • 91.69
  • 88.63
  • 87.94
  • 87.64
  • 68.99
  • 65.08
  • 54.62
  • 54.32
  • 53.69
  • 49.92
  • 49.81
  • 49.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.76e3
  • 1.76e3
  • 2.23e3
  • 3.44e3
94.12
  • 94.12
  • 92.52
  • 88.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.26
  • 93.26
AEIR
  • AEIR
CL:0000763myeloid cell
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000036Larval:Day 4
  • ZFS:0000039Larval:Days 7-13
  • ZFS:0000030Pharyngula:Prim-15
2.49e3
  • 2.49e3
  • 4.98e3
  • 7.47e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
91.67
  • 91.67
  • 83.34
  • 75.00
  • 66.67
  • 66.67
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.95e3
  • 2.95e3
  • 9.21e3
90.14
  • 90.14
  • 69.16
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
3.12e3
  • 3.12e3
  • 1.17e4
89.54
  • 89.54
  • 60.73
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.53e3
  • 3.53e3
88.19
  • 88.19
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.90e3
  • 3.90e3
86.94
  • 86.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.40e3
  • 5.40e3
81.91
  • 81.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.87e3
  • 5.87e3
80.34
  • 80.34
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.70e3
  • 6.70e3
77.57
  • 77.57
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
  • 1.38e4
75.96
  • 75.96
  • 53.67
AEIR
  • AEIR
  • AEIR
CL:0000775neutrophil
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
7.47e3
  • 7.47e3
  • 9.96e3
  • 9.96e3
  • 1.49e4
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 66.67
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • ZFS:0000038Larval:Day 6
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
  • 1.12e4
  • 1.50e4
75.00
  • 75.00
  • 62.50
  • 49.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004739pronephric glomerulus
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0018549ventral wall of dorsal aorta
  • ZFS:0000037Larval:Day 5
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:2000084yolk
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
7.47e3
  • 7.47e3
  • 9.96e3
  • 1.49e4
75.00
  • 75.00
  • 66.67
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000235macrophage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
7.47e3
  • 7.47e3
  • 1.19e4
  • 1.19e4
  • 1.33e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
74.99
  • 74.99
  • 60.00
  • 60.00
  • 55.55
  • 50.00
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
7.64e3
  • 7.64e3
  • 8.98e3
  • 1.02e4
74.43
  • 74.43
  • 69.94
  • 65.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.71
  • 71.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.98e3
  • 8.98e3
69.94
  • 69.94
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.76e3
  • 9.76e3
67.33
  • 67.33
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.02e4
  • 1.02e4
  • 1.12e4
  • 1.12e4
65.77
  • 65.77
  • 62.50
  • 62.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.19e4
62.50
  • 62.50
  • 62.50
  • 60.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002065posterior cardinal vein
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
58.33
  • 58.33
AEIR
  • AEIR
UBERON:0005253head mesenchyme
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
1.39e4
  • 1.39e4
  • 1.39e4
  • 1.39e4
53.31
  • 53.31
  • 53.31
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000738leukocyte
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000766myeloid leukocyte
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000839myeloid lineage restricted progenitor cell
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
ZFA:0005040posterior lateral mesoderm (Danio)
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000028Segmentation:26+ somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:2005029rostral blood island
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
  • 1.49e4
50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.50e4
  • 1.50e4
  • 1.54e4
  • 1.66e4
49.80
  • 49.80
  • 48.43
  • 44.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.77e4
  • 1.77e4
40.84
  • 40.84
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.18e4
  • 2.18e4
26.96
  • 26.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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