D. rerio Gene: hoxd10a - ENSDARG00000057859 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000057859
Namehoxd10a
Descriptionhomeobox D10a [Source:ZFIN;Acc:ZDB-GENE-990415-116]
OrganismDanio rerio (zebrafish)
Synonym(s)a8e5n6, hox-d10, hoxc10, hoxd-10, hoxd10, o57371, p79730, p79731, q6iqs5, z-82

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.82e3
  • 1.82e3
93.91
  • 93.91
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.93e3
  • 1.93e3
93.55
  • 93.55
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.34e3
  • 2.34e3
92.16
  • 92.16
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.79
  • 81.79
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
7.29e3
  • 7.29e3
  • 7.85e3
  • 8.02e3
  • 8.02e3
  • 8.15e3
  • 8.20e3
  • 8.70e3
  • 9.13e3
  • 1.02e4
  • 1.15e4
75.60
  • 75.60
  • 73.73
  • 73.16
  • 73.16
  • 72.72
  • 72.54
  • 70.88
  • 69.43
  • 65.82
  • 61.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005419pectoral appendage bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
7.47e3
  • 7.47e3
  • 7.47e3
  • 9.96e3
  • 1.28e4
75.00
  • 75.00
  • 75.00
  • 66.66
  • 57.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
8.54e3
  • 8.54e3
71.41
  • 71.41
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.01e4
  • 1.01e4
  • 1.05e4
  • 1.12e4
66.14
  • 66.14
  • 64.86
  • 62.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.95
  • 65.95
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000068embryo stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
1.02e4
  • 1.02e4
  • 1.09e4
  • 1.15e4
  • 1.16e4
  • 1.17e4
  • 1.32e4
  • 1.40e4
  • 1.47e4
  • 1.50e4
  • 1.50e4
  • 1.55e4
  • 1.62e4
65.74
  • 65.74
  • 63.48
  • 61.56
  • 60.99
  • 60.83
  • 55.91
  • 53.03
  • 50.85
  • 49.89
  • 49.81
  • 47.94
  • 45.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.06e4
  • 1.06e4
  • 1.75e4
64.61
  • 64.61
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.40
  • 64.40
AEIR
  • AEIR
UBERON:0003934mesenchyme pectoral fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
1.12e4
  • 1.12e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
62.50
  • 62.50
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.13e4
  • 1.13e4
62.09
  • 62.09
AEIR
  • AEIR
UBERON:0003104mesenchyme
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0005729pectoral appendage field
  • ZFS:0000029Pharyngula:Prim-5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.07
  • 39.07
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.53
  • 34.53
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.73
  • 26.73
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.35e4
  • 2.35e4
21.19
  • 21.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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