D. rerio Gene: ormdl2 - ENSDARG00000058022 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058022
Nameormdl2
DescriptionORMDL sphingolipid biosynthesis regulator 2 [Source:ZFIN;Acc:ZDB-GENE-060331-113]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:136901
Orthologs(s)23 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.29e3
  • 1.29e3
95.70
  • 95.70
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.85
  • 90.85
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.05
  • 90.05
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.62e3
  • 3.62e3
87.90
  • 87.90
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
3.78e3
  • 3.78e3
87.35
  • 87.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
3.96e3
  • 3.96e3
  • 4.38e3
86.74
  • 86.74
  • 85.32
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.81
  • 85.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.79e3
  • 4.79e3
83.97
  • 83.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
83.74
  • 83.74
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
5.06e3
  • 5.06e3
  • 5.12e3
83.07
  • 83.07
  • 82.87
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.20e3
  • 5.20e3
82.58
  • 82.58
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
  • 8.02e3
82.51
  • 82.51
  • 73.14
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.44e3
  • 5.44e3
81.80
  • 81.80
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
5.58e3
  • 5.58e3
  • 6.05e3
  • 6.10e3
  • 6.22e3
  • 8.01e3
81.33
  • 81.33
  • 79.74
  • 79.58
  • 79.18
  • 73.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.19e3
  • 6.19e3
  • 7.14e3
79.28
  • 79.28
  • 76.08
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.20e3
  • 6.20e3
79.24
  • 79.24
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.61e3
  • 6.61e3
77.87
  • 77.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
  • 6.89e3
77.34
  • 77.34
  • 76.95
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.81e3
  • 6.81e3
77.20
  • 77.20
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.91e3
  • 8.91e3
70.18
  • 70.18
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.41e3
  • 9.41e3
68.48
  • 68.48
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.40e4
  • 1.40e4
53.18
  • 53.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species17 genesCompare expression
Bilateria22 species23 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058022.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058022.

Cross-references

EnsemblENSDARG00000058022 (ormdl2)
ZFINZDB-GENE-060331-113 (ormdl2)
EMBLBC114303, BX927210
Uniprot/SPTREMBLQ24JV2, Q24JV2_DANRE

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