D. rerio Gene: rpl36a - ENSDARG00000058105 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058105
Namerpl36a
Descriptionribosomal protein L36A [Source:ZFIN;Acc:ZDB-GENE-020423-1]
OrganismDanio rerio (zebrafish)
Synonym(s)60s ribosomal protein l44, bbr, bubble brain, q90vx4, rl44
Orthologs(s)52 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
12.9
  • 12.9
  • 19.4
  • 30.2
  • 55.0
  • 122
  • 123
  • 151
  • 171
  • 242
  • 243
99.96
  • 99.96
  • 99.94
  • 99.90
  • 99.82
  • 99.60
  • 99.59
  • 99.50
  • 99.43
  • 99.19
  • 99.19
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
28.7
  • 28.7
  • 38.8
  • 109
  • 140
  • 176
  • 410
99.91
  • 99.91
  • 99.87
  • 99.64
  • 99.53
  • 99.42
  • 98.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
41.6
  • 41.6
  • 130
99.86
  • 99.86
  • 99.57
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
  • ZFS:0000049segmentation
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
58.4
  • 58.4
  • 60.2
  • 60.2
  • 65.6
  • 67.8
  • 76.5
  • 77.6
  • 84.1
  • 101
  • 110
  • 112
  • 116
  • 124
  • 920
  • 1.35e4
  • 1.43e4
  • 1.49e4
  • 1.50e4
99.81
  • 99.81
  • 99.80
  • 99.80
  • 99.78
  • 99.78
  • 99.75
  • 99.74
  • 99.72
  • 99.67
  • 99.64
  • 99.63
  • 99.61
  • 99.59
  • 96.92
  • 54.64
  • 51.99
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
97.1
  • 97.1
99.68
  • 99.68
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
103
  • 103
99.66
  • 99.66
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
108
  • 108
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
109
  • 109
99.64
  • 99.64
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
116
  • 116
99.61
  • 99.61
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
117
  • 117
99.61
  • 99.61
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
119
  • 119
  • 1.31e3
  • 9.97e3
99.60
  • 99.60
  • 95.63
  • 66.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
120
  • 120
99.60
  • 99.60
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
131
  • 131
99.56
  • 99.56
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
138
  • 138
  • 163
  • 212
99.54
  • 99.54
  • 99.46
  • 99.29
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
139
  • 139
  • 1.28e4
99.54
  • 99.54
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
140
  • 140
  • 161
  • 1.21e3
  • 2.02e3
99.53
  • 99.53
  • 99.47
  • 95.94
  • 93.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
147
  • 147
  • 1.50e4
99.51
  • 99.51
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
153
  • 153
  • 1.19e4
99.49
  • 99.49
  • 60.00
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
157
  • 157
99.48
  • 99.48
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
161
  • 161
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
173
  • 173
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
174
  • 174
99.42
  • 99.42
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
186
  • 186
  • 1.37e3
  • 1.03e4
99.38
  • 99.38
  • 95.40
  • 65.36
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
189
  • 189
  • 192
99.37
  • 99.37
  • 99.36
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
192
  • 192
99.36
  • 99.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
214
  • 214
99.29
  • 99.29
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
279
  • 279
  • 458
  • 570
  • 810
  • 1.50e3
99.07
  • 99.07
  • 98.47
  • 98.09
  • 97.29
  • 94.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
500
  • 500
  • 1.47e4
98.33
  • 98.33
  • 50.63
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
531
  • 531
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
667
  • 667
97.77
  • 97.77
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.12e3
  • 2.12e3
92.90
  • 92.90
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.43e3
  • 5.43e3
81.83
  • 81.83
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.19e3
  • 6.19e3
79.28
  • 79.28
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
9.45e3
  • 9.45e3
68.35
  • 68.35
AEIR
  • AEIR
UBERON:0001264pancreas
  • ZFS:0000035Larval:Protruding-mouth
1.28e4
  • 1.28e4
57.14
  • 57.14
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
57.13
  • 57.13
AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000033Hatching:Long-pec
1.33e4
  • 1.33e4
55.55
  • 55.55
AEIR
  • AEIR
UBERON:0002539pharyngeal arch
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
UBERON:0000016endocrine pancreas
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000017exocrine pancreas
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species46 genesCompare expression
Bilateria25 species52 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058105.

Cross-references

EnsemblENSDARG00000058105 (rpl36a)
ZFINZDB-GENE-020423-1 (rpl36a)
EMBLAY099511, BC055187
Uniprot/SWISSPROTP61485, RL36A_DANRE

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