D. rerio Gene: zdhhc20b - ENSDARG00000058178 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058178
Namezdhhc20b
Descriptionzinc finger, DHHC-type containing 20b [Source:ZFIN;Acc:ZDB-GENE-091117-30]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-11p10.6
Orthologs(s)26 orthologs
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.60
  • 84.60
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.81e3
  • 4.81e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.86e3
  • 4.86e3
83.72
  • 83.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
4.98e3
  • 4.98e3
  • 6.48e3
  • 7.34e3
  • 8.23e3
  • 9.49e3
83.33
  • 83.33
  • 78.30
  • 75.41
  • 72.46
  • 68.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.95e3
  • 5.95e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
5.99e3
  • 5.99e3
  • 8.30e3
  • 8.53e3
  • 1.03e4
79.94
  • 79.94
  • 72.22
  • 71.45
  • 65.67
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.04e3
  • 6.04e3
79.79
  • 79.79
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.08e3
  • 6.08e3
79.63
  • 79.63
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.40e3
  • 6.40e3
78.56
  • 78.56
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.68e3
  • 6.68e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.98e3
  • 6.98e3
76.64
  • 76.64
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.17e3
  • 7.17e3
75.99
  • 75.99
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
7.18e3
  • 7.18e3
  • 7.34e3
  • 7.50e3
  • 7.98e3
  • 8.11e3
  • 1.14e4
75.95
  • 75.95
  • 75.42
  • 74.88
  • 73.27
  • 72.85
  • 61.71
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
7.69e3
  • 7.69e3
  • 8.08e3
  • 8.63e3
  • 8.87e3
  • 8.89e3
  • 9.06e3
  • 1.02e4
  • 1.04e4
  • 1.06e4
  • 1.07e4
74.24
  • 74.24
  • 72.95
  • 71.09
  • 70.30
  • 70.25
  • 69.67
  • 65.84
  • 65.22
  • 64.56
  • 64.25
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.99e3
  • 7.99e3
73.26
  • 73.26
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.01e3
  • 8.01e3
  • 9.45e3
73.20
  • 73.20
  • 68.37
AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.05e3
  • 8.05e3
  • 8.42e3
73.05
  • 73.05
  • 71.79
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
8.20e3
  • 8.20e3
72.53
  • 72.53
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.49
  • 72.49
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.29e3
  • 8.29e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
  • 8.83e3
70.79
  • 70.79
  • 70.42
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
69.99
  • 69.99
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
8.98e3
  • 8.98e3
  • 9.91e3
  • 1.01e4
  • 1.05e4
  • 1.07e4
  • 1.10e4
  • 1.14e4
  • 1.18e4
  • 1.23e4
  • 1.23e4
  • 1.23e4
  • 1.30e4
  • 1.30e4
  • 1.35e4
69.94
  • 69.94
  • 66.81
  • 66.06
  • 64.89
  • 64.21
  • 63.10
  • 61.85
  • 60.36
  • 58.87
  • 58.84
  • 58.82
  • 56.46
  • 56.37
  • 54.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.05e3
  • 9.05e3
69.70
  • 69.70
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.12e3
  • 9.12e3
69.45
  • 69.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.92
  • 68.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.98e3
  • 9.98e3
66.58
  • 66.58
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
66.00
  • 66.00
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.05e4
  • 1.05e4
  • 1.17e4
  • 1.20e4
64.75
  • 64.75
  • 60.69
  • 59.68
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.95
  • 52.95
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi19 species19 genesCompare expression
Bilateria26 species26 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058178.

Paralogs (same species)

Paralogy information comes from OMA : ENSDARG00000058178.

Cross-references

EnsemblENSDARG00000058178 (zdhhc20b)
ZFINZDB-GENE-091117-30 (zdhhc20b)
Uniprot/SPTREMBLE7F587, E7F587_DANRE, F1QRT3, F1QRT3_DANRE

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