Gene: neu3.3 - ENSDARG00000058327 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000058327
Name	neu3.3
Description	sialidase 3 (membrane sialidase), tandem duplicate 3 [Source:ZFIN;Acc:ZDB-GENE-061103-511]
Organism	Danio rerio (zebrafish)
Synonym(s)	neuc.1, sb:eu489, zgc:153998
Orthologs(s)	1 orthologs
Paralog(s)	5 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	4.24e3 4.24e3	85.82 85.82	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	9.56e3 9.56e3	67.99 67.99	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.09e4 1.09e4	63.56 63.56	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	1.09e4 1.09e4 2.57e4	63.50 63.50 13.87	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.12e4 1.12e4	62.60 62.60	AEIR AEIR
UBERON:0000922	embryo	[+] 1 stage ZFS:0000037Larval:Day 5	1.16e4 1.16e4	61.00 61.00	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.36e4 1.36e4	54.42 54.42	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.38e4 1.38e4	53.72 53.72	AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	1.69e4 1.69e4 1.96e4	43.56 43.56 34.41	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	1.73e4 1.73e4	41.92 41.92	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.82e4 1.82e4	39.17 39.17	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.84e4 1.84e4	38.54 38.54	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	2.01e4 2.01e4	32.75 32.75	AEIR AEIR
UBERON:0000948	heart	[+] 1 stage UBERON:0000066fully formed stage	2.08e4 2.08e4	30.31 30.31	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	2.18e4 2.18e4	26.98 26.98	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	1 species Xenopus tropicalis (western clawed frog)	1 gene ENSXETG00000033668	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000058327.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Clupeocephala	3 genes ENSDARG00000010047 neu3.2 ENSDARG00000096368 neu3.5 ENSDARG00000096381 neu3.4	Compare expression	[+]
Chordata	5 genes ENSDARG00000010047 neu3.2 ENSDARG00000057677 neu4 ENSDARG00000096368 neu3.5 ENSDARG00000096381 neu3.4 ENSDARG00000096382 neu3.1	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000058327.

Cross-references

Ensembl	ENSDARG00000058327 (neu3.3)
ZFIN	ZDB-GENE-061103-511 (neu3.3)
EMBL	BC125931, BC164496, CU928016, EF107698
Uniprot/SPTREMBL	A0JMM3, A0JMM3_DANRE