D. rerio Gene: scinlb - ENSDARG00000058348 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058348
Namescinlb
Descriptionscinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
OrganismDanio rerio (zebrafish)
Synonym(s)wu:fe16f08, zgc:77481
Orthologs(s)6 orthologs
Paralog(s)7 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
153
  • 153
99.49
  • 99.49
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
706
  • 706
97.64
  • 97.64
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
721
  • 721
  • 8.51e3
97.59
  • 97.59
  • 71.50
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
787
  • 787
97.37
  • 97.37
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
925
  • 925
  • 1.36e4
96.91
  • 96.91
  • 54.45
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
95.97
  • 95.97
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.31e3
  • 1.31e3
95.60
  • 95.60
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.62e3
  • 1.62e3
94.57
  • 94.57
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.79e3
  • 1.79e3
94.02
  • 94.02
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.27
  • 93.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.97e3
  • 2.97e3
90.05
  • 90.05
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.41e3
  • 4.41e3
85.25
  • 85.25
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
4.57e3
  • 4.57e3
  • 6.17e3
  • 6.18e3
  • 6.41e3
  • 6.54e3
  • 8.91e3
84.72
  • 84.72
  • 79.35
  • 79.31
  • 78.54
  • 78.09
  • 70.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.57e3
  • 4.57e3
  • 8.88e3
  • 1.02e4
84.71
  • 84.71
  • 70.25
  • 65.85
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
4.63e3
  • 4.63e3
  • 6.66e3
  • 7.19e3
  • 7.41e3
  • 9.30e3
  • 9.32e3
  • 9.34e3
  • 9.47e3
  • 1.03e4
  • 1.04e4
  • 1.04e4
  • 1.06e4
  • 1.07e4
  • 1.14e4
  • 1.42e4
  • 1.44e4
  • 1.46e4
84.48
  • 84.48
  • 77.70
  • 75.91
  • 75.18
  • 68.87
  • 68.79
  • 68.74
  • 68.28
  • 65.49
  • 65.17
  • 65.16
  • 64.61
  • 64.30
  • 61.92
  • 52.43
  • 51.88
  • 51.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
5.31e3
  • 5.31e3
  • 6.11e3
  • 7.08e3
  • 8.59e3
  • 8.66e3
  • 1.25e4
  • 1.49e4
  • 1.56e4
82.23
  • 82.23
  • 79.53
  • 76.28
  • 71.24
  • 71.02
  • 58.25
  • 50.06
  • 47.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
  • ZFS:0000038Larval:Day 6
5.73e3
  • 5.73e3
  • 1.49e4
80.82
  • 80.82
  • 50.00
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.80
  • 77.80
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.08e3
  • 9.08e3
  • 1.12e4
69.61
  • 69.61
  • 62.42
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.03e4
  • 1.03e4
65.64
  • 65.64
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.05e4
  • 1.05e4
  • 1.34e4
64.99
  • 64.99
  • 54.97
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.05e4
  • 1.05e4
64.77
  • 64.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000038Larval:Day 6
1.11e4
  • 1.11e4
  • 1.15e4
  • 1.34e4
  • 1.49e4
62.68
  • 62.68
  • 61.57
  • 54.99
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.25
  • 60.25
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
58.86
  • 58.86
AEIR
  • AEIR
UBERON:0003079floor plate
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
56.23
  • 56.23
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.42e4
55.16
  • 55.16
  • 52.57
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.34e4
  • 1.34e4
  • 1.62e4
  • 1.63e4
55.16
  • 55.16
  • 45.59
  • 45.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.01
  • 55.01
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
  • 1.35e4
54.97
  • 54.97
  • 54.96
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
  • 1.65e4
54.52
  • 54.52
  • 44.67
AEIR
  • AEIR
  • AEIR
UBERON:0002538hatching gland
  • ZFS:0000029Pharyngula:Prim-5
1.38e4
  • 1.38e4
53.83
  • 53.83
AEIR
  • AEIR
UBERON:0000964cornea
  • ZFS:0000042Juvenile:Days 30-44
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0001042chordate pharynx
  • ZFS:0000038Larval:Day 6
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0007844cartilage element
  • ZFS:0000038Larval:Day 6
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Orthology information comes from OMA : ENSDARG00000058348.

Paralogs (same species)

Cross-references

EnsemblENSDARG00000058348 (scinlb)
ZFINZDB-GENE-040426-2068 (scinlb)
EMBLBX927121
Uniprot/SPTREMBLA5PMZ3, A5PMZ3_DANRE

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