D. rerio Gene: krt5 - ENSDARG00000058371 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058371
Namekrt5
Descriptionkeratin 5 [Source:ZFIN;Acc:ZDB-GENE-991110-23]
OrganismDanio rerio (zebrafish)
Synonym(s)ckii, wu:fb02h09, wu:fj02d02, wu:fk78b12, zfckii
Orthologs(s)1 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.62
  • 5.62
99.98
  • 99.98
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
9.00
  • 9.00
  • 209
99.97
  • 99.97
  • 99.30
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
67.0
  • 67.0
99.78
  • 99.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
81.7
  • 81.7
  • 157
  • 197
  • 231
  • 289
  • 497
99.73
  • 99.73
  • 99.48
  • 99.34
  • 99.23
  • 99.04
  • 98.34
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
98.0
  • 98.0
  • 122
  • 136
  • 167
  • 194
  • 198
  • 219
  • 293
  • 348
  • 1.31e3
99.68
  • 99.68
  • 99.60
  • 99.55
  • 99.44
  • 99.35
  • 99.34
  • 99.27
  • 99.02
  • 98.84
  • 95.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
126
  • 126
99.58
  • 99.58
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
134
  • 134
  • 278
99.55
  • 99.55
  • 99.07
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
171
  • 171
  • 259
  • 432
99.43
  • 99.43
  • 99.14
  • 98.56
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
172
  • 172
99.43
  • 99.43
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
321
  • 321
  • 4.96e3
98.93
  • 98.93
  • 83.39
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
332
  • 332
  • 335
  • 352
  • 369
  • 370
  • 380
  • 423
  • 433
  • 483
  • 501
  • 706
  • 707
  • 807
  • 1.04e3
  • 1.66e3
  • 9.97e3
  • 1.21e4
  • 1.34e4
  • 1.49e4
98.89
  • 98.89
  • 98.88
  • 98.82
  • 98.77
  • 98.77
  • 98.73
  • 98.59
  • 98.55
  • 98.39
  • 98.33
  • 97.64
  • 97.63
  • 97.30
  • 96.51
  • 94.45
  • 66.61
  • 59.33
  • 55.06
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
342
  • 342
98.86
  • 98.86
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
360
  • 360
98.80
  • 98.80
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
592
  • 592
98.02
  • 98.02
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
689
  • 689
  • 5.79e3
  • 9.20e3
97.69
  • 97.69
  • 80.62
  • 69.21
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
963
  • 963
  • 2.30e3
  • 1.48e4
96.78
  • 96.78
  • 92.31
  • 50.37
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000151pectoral fin
  • UBERON:0000066fully formed stage
1.24e3
  • 1.24e3
95.84
  • 95.84
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.29e3
  • 1.29e3
95.67
  • 95.67
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.35e3
  • 1.35e3
95.49
  • 95.49
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.61e3
  • 1.61e3
94.62
  • 94.62
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
1.97e3
  • 1.97e3
  • 1.28e4
93.42
  • 93.42
  • 57.14
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
3.78e3
  • 3.78e3
87.34
  • 87.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.38
  • 74.38
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.52e3
  • 8.52e3
71.46
  • 71.46
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.75e3
  • 8.75e3
70.71
  • 70.71
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
8.96e3
  • 8.96e3
  • 9.60e3
  • 9.96e3
  • 9.96e3
  • 9.96e3
  • 1.10e4
  • 1.16e4
  • 1.49e4
69.99
  • 69.99
  • 67.85
  • 66.66
  • 66.65
  • 66.65
  • 63.32
  • 61.09
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
1.12e4
  • 1.12e4
  • 1.12e4
  • 1.36e4
  • 1.36e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
62.49
  • 62.49
  • 62.49
  • 54.53
  • 54.53
  • 49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.96
  • 59.96
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.20e4
  • 1.20e4
59.69
  • 59.69
AEIR
  • AEIR
UBERON:0003055periderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.21e4
  • 1.21e4
  • 1.28e4
  • 1.29e4
  • 1.29e4
  • 1.41e4
59.36
  • 59.36
  • 57.14
  • 56.65
  • 56.65
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.36e4
  • 1.36e4
54.59
  • 54.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.39
  • 50.39
AEIR
  • AEIR
CL:0000362epidermal cell
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
  • 1.61e4
49.89
  • 49.89
  • 46.21
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
40.97
  • 40.97
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000058371.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000058371.

Cross-references

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