D. rerio Gene: bves - ENSDARG00000058548 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058548
Namebves
Descriptionblood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
OrganismDanio rerio (zebrafish)
Synonym(s)pop1, popdc1, q6jwv9, zgc:86887
Orthologs(s)17 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
286
  • 286
  • 323
  • 1.21e4
99.05
  • 99.05
  • 98.92
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e3
  • 1.50e3
94.99
  • 94.99
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.57e3
  • 3.57e3
88.06
  • 88.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.89e3
  • 3.89e3
86.98
  • 86.98
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
4.43e3
  • 4.43e3
  • 5.89e3
85.17
  • 85.17
  • 80.27
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
4.45e3
  • 4.45e3
  • 6.23e3
  • 7.14e3
  • 7.59e3
  • 7.96e3
85.09
  • 85.09
  • 79.15
  • 76.11
  • 74.59
  • 73.35
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000032Pharyngula:High-pec
  • UBERON:00072334 cell stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
5.97e3
  • 5.97e3
  • 6.79e3
  • 7.47e3
  • 7.91e3
  • 9.96e3
  • 1.30e4
  • 1.46e4
  • 1.47e4
  • 1.50e4
80.00
  • 80.00
  • 77.27
  • 74.99
  • 73.52
  • 66.65
  • 56.38
  • 51.01
  • 50.68
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.70
  • 74.70
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.88e3
  • 7.88e3
  • 1.52e4
73.62
  • 73.62
  • 48.98
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.63e3
  • 9.63e3
67.75
  • 67.75
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.15
  • 63.15
AEIR
  • AEIR
UBERON:0004141heart tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.19e4
  • 1.19e4
  • 1.27e4
  • 1.41e4
59.99
  • 59.99
  • 57.47
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.83
  • 59.83
AEIR
  • AEIR
UBERON:0007383enveloping layer of ectoderm
  • ZFS:0000020Gastrula:75%-epiboly
1.22e4
  • 1.22e4
59.08
  • 59.08
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.46e4
58.33
  • 58.33
  • 51.26
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.76
  • 55.76
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.40
  • 55.40
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
  • 1.76e4
54.99
  • 54.99
  • 40.90
AEIR
  • AEIR
  • AEIR
UBERON:0001003skin epidermis
  • ZFS:0000029Pharyngula:Prim-5
1.42e4
  • 1.42e4
52.35
  • 52.35
AEIR
  • AEIR
UBERON:0007812post-anal tail
  • ZFS:0000030Pharyngula:Prim-15
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.52e4
  • 1.52e4
  • 1.64e4
49.18
  • 49.18
  • 44.98
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.53e4
  • 1.53e4
48.62
  • 48.62
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.61e4
  • 1.61e4
46.13
  • 46.13
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.59
  • 45.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.59
  • 41.59
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.82e4
  • 1.82e4
39.16
  • 39.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058548.

Cross-references

EnsemblENSDARG00000058548 (bves)
ZFINZDB-GENE-040624-11 (bves)
EMBLAY293117, AY293118, BC086956, JN400527
Uniprot/SPTREMBLG9HVJ5, G9HVJ5_DANRE
Uniprot/SWISSPROTPOPD1_DANRE, Q5PQZ7

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