D. rerio Gene: ubox5 - ENSDARG00000058563 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058563
Nameubox5
DescriptionU-box domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-110411-166]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch73-368o6.1
Orthologs(s)17 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.27e3
  • 5.27e3
82.35
  • 82.35
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
7.52e3
  • 7.52e3
  • 1.50e4
74.81
  • 74.81
  • 49.92
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
7.88e3
  • 7.88e3
73.61
  • 73.61
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
8.06e3
  • 8.06e3
73.03
  • 73.03
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.07e3
  • 8.07e3
72.97
  • 72.97
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.31e3
  • 8.31e3
  • 9.45e3
72.16
  • 72.16
  • 68.36
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
  • 1.81e4
68.66
  • 68.66
  • 39.28
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.68e3
  • 9.68e3
67.58
  • 67.58
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.83e3
  • 9.83e3
  • 1.09e4
67.09
  • 67.09
  • 63.43
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.73
  • 66.73
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.00e4
  • 1.00e4
66.35
  • 66.35
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.01e4
  • 1.01e4
  • 1.12e4
66.14
  • 66.14
  • 62.41
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.07e4
  • 1.07e4
64.26
  • 64.26
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.15
  • 64.15
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
  • 1.26e4
62.44
  • 62.44
  • 57.83
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.13e4
  • 1.13e4
  • 1.17e4
  • 1.27e4
  • 1.28e4
  • 1.36e4
62.32
  • 62.32
  • 60.69
  • 57.35
  • 57.09
  • 54.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.00
  • 62.00
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.40
  • 61.40
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.23
  • 61.23
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.94
  • 60.94
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.52
  • 59.52
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.77
  • 55.77
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.52
  • 44.52
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.01
  • 36.01
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000058563 (ubox5)
ZFINZDB-GENE-110411-166 (ubox5)
EMBLCU469500
Uniprot/SPTREMBLF1R6T8, F1R6T8_DANRE

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