D. rerio Gene: gdap1 - ENSDARG00000058601 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058601
Namegdap1
Descriptionganglioside induced differentiation associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-424]
OrganismDanio rerio (zebrafish)
Synonym(s)si:rp71-1m12.2, zgc:112286
Orthologs(s)24 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
2.34e3
  • 2.34e3
  • 1.42e4
92.18
  • 92.18
  • 52.31
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
  • 5.91e3
86.47
  • 86.47
  • 80.22
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
  • 1.30e4
  • 1.47e4
83.04
  • 83.04
  • 56.58
  • 50.73
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
6.34e3
  • 6.34e3
  • 1.00e4
  • 1.43e4
  • 1.59e4
  • 1.61e4
  • 1.61e4
  • 1.78e4
  • 1.81e4
78.76
  • 78.76
  • 66.36
  • 52.11
  • 46.89
  • 46.00
  • 46.00
  • 40.40
  • 39.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.76e3
  • 8.76e3
70.67
  • 70.67
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.10e3
  • 9.10e3
69.54
  • 69.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.18e3
  • 9.18e3
69.25
  • 69.25
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
9.34e3
  • 9.34e3
  • 1.50e4
  • 1.50e4
  • 1.50e4
  • 1.76e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
68.74
  • 68.74
  • 49.92
  • 49.80
  • 49.79
  • 41.14
  • 40.18
  • 39.85
  • 39.42
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.79e3
  • 9.79e3
67.22
  • 67.22
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
1.04e4
  • 1.04e4
  • 1.47e4
  • 1.66e4
65.22
  • 65.22
  • 50.86
  • 44.32
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.17e4
  • 1.17e4
  • 1.89e4
60.85
  • 60.85
  • 36.86
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.15
  • 59.15
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.26e4
  • 1.26e4
  • 1.26e4
  • 1.28e4
  • 1.32e4
  • 1.32e4
  • 1.39e4
  • 1.39e4
57.87
  • 57.87
  • 57.68
  • 57.13
  • 55.86
  • 55.86
  • 53.55
  • 53.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.42e4
  • 1.42e4
52.59
  • 52.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.76e4
  • 1.76e4
41.23
  • 41.23
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.90e4
  • 1.90e4
36.24
  • 36.24
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.98e4
  • 1.98e4
33.83
  • 33.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.53
  • 30.53
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria24 species24 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058601.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000058601.

Cross-references

EnsemblENSDARG00000058601 (gdap1)
ZFINZDB-GENE-050522-424 (gdap1)
EMBLAL627168
Uniprot/SPTREMBLF1R9R0, F1R9R0_DANRE

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