D. rerio Gene: sik1 - ENSDARG00000058606 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058606
Namesik1
Descriptionsalt-inducible kinase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9446]
OrganismDanio rerio (zebrafish)
Synonym(s)fj78h07, si:ch211-235e18.3, wu:fj78h07
Orthologs(s)16 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
205
  • 205
  • 234
  • 1.16e4
  • 1.37e4
99.32
  • 99.32
  • 99.22
  • 61.17
  • 53.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
492
  • 492
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
695
  • 695
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
750
  • 750
97.49
  • 97.49
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.16e3
  • 1.16e3
  • 5.33e3
96.13
  • 96.13
  • 82.17
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.28e3
  • 1.28e3
95.71
  • 95.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.45
  • 95.45
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.42e3
  • 1.42e3
  • 2.38e3
95.26
  • 95.26
  • 92.02
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e3
  • 1.45e3
95.16
  • 95.16
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
2.85e3
  • 2.85e3
  • 4.27e3
  • 5.37e3
  • 6.20e3
  • 7.59e3
  • 7.61e3
  • 9.81e3
  • 1.06e4
  • 1.11e4
  • 1.23e4
90.48
  • 90.48
  • 85.71
  • 82.04
  • 79.24
  • 74.60
  • 74.53
  • 67.15
  • 64.54
  • 62.92
  • 58.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.64e3
  • 3.64e3
87.81
  • 87.81
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.88e3
  • 3.88e3
87.00
  • 87.00
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
5.06e3
  • 5.06e3
  • 5.62e3
  • 6.61e3
83.06
  • 83.06
  • 81.18
  • 77.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000020Gastrula:75%-epiboly
5.12e3
  • 5.12e3
  • 7.50e3
  • 8.48e3
  • 9.82e3
  • 1.02e4
  • 1.08e4
  • 1.10e4
  • 1.13e4
  • 1.28e4
  • 1.32e4
  • 1.38e4
  • 1.40e4
  • 1.41e4
  • 1.41e4
  • 1.46e4
82.86
  • 82.86
  • 74.89
  • 71.60
  • 67.11
  • 65.74
  • 63.90
  • 63.17
  • 62.26
  • 57.30
  • 55.90
  • 53.82
  • 52.98
  • 52.87
  • 52.86
  • 51.24
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.24e3
  • 5.24e3
82.45
  • 82.45
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.55e3
  • 5.55e3
  • 1.05e4
81.40
  • 81.40
  • 64.81
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.12
  • 79.12
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.28e3
  • 6.28e3
78.97
  • 78.97
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.40e3
  • 8.40e3
71.88
  • 71.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.04
  • 65.04
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
1.09e4
  • 1.09e4
  • 1.22e4
  • 1.23e4
  • 1.29e4
  • 1.44e4
  • 1.68e4
63.59
  • 63.59
  • 59.13
  • 58.73
  • 56.71
  • 51.90
  • 43.69
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.15e4
  • 1.15e4
61.47
  • 61.47
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000016Blastula:30%-epiboly
1.51e4
  • 1.51e4
49.54
  • 49.54
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.53e4
  • 1.53e4
48.72
  • 48.72
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.12
  • 45.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000058606 (sik1)
ZFINZDB-GENE-030131-9446 (sik1)
EMBLBX537313
Uniprot/SPTREMBLA0A0G2L7B5, A0A0G2L7B5_DANRE, B0S6K0, B0S6K0_DANRE

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