D. rerio Gene: si:ch211-71m22.1 - ENSDARG00000058638 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058638
Namesi:ch211-71m22.1
Descriptionsi:ch211-71m22.1 [Source:ZFIN;Acc:ZDB-GENE-070705-193]
OrganismDanio rerio (zebrafish)
Orthologs(s)33 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.84e3
  • 2.84e3
90.50
  • 90.50
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.82
  • 89.82
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.13e3
  • 3.13e3
  • 3.35e3
89.53
  • 89.53
  • 88.79
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.37
  • 81.37
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.68e3
  • 5.68e3
80.97
  • 80.97
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.47
  • 78.47
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.04e3
  • 7.04e3
  • 1.74e4
76.42
  • 76.42
  • 41.75
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.05e3
  • 7.05e3
76.40
  • 76.40
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.56e3
  • 7.56e3
74.67
  • 74.67
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
7.76e3
  • 7.76e3
  • 1.50e4
74.03
  • 74.03
  • 49.62
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.81e3
  • 7.81e3
73.86
  • 73.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
8.50e3
  • 8.50e3
  • 1.04e4
71.53
  • 71.53
  • 65.33
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.02e3
  • 9.02e3
69.80
  • 69.80
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.51e3
  • 9.51e3
68.17
  • 68.17
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.68e3
  • 9.68e3
67.57
  • 67.57
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.07
  • 66.07
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.47
  • 65.47
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.04e4
  • 1.04e4
  • 1.44e4
  • 1.66e4
  • 1.76e4
  • 1.82e4
65.04
  • 65.04
  • 51.81
  • 44.38
  • 40.97
  • 39.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e4
  • 1.08e4
63.78
  • 63.78
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.08e4
  • 1.08e4
  • 1.70e4
63.76
  • 63.76
  • 43.01
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
56.11
  • 56.11
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.33e4
  • 1.33e4
55.38
  • 55.38
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi16 species23 genesCompare expression
Bilateria22 species33 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058638.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Clupeocephala1 geneCompare expression
Euteleostomi4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058638.

Cross-references

EnsemblENSDARG00000058638 (si:ch211-71m22.1)
ZFINZDB-GENE-070705-193 (si:ch211-71m22.1)
EMBLCT027589
Uniprot/SPTREMBLA5WVT4, A5WVT4_DANRE

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