D. rerio Gene: ube2r2 - ENSDARG00000058740 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058740
Nameube2r2
Descriptionubiquitin-conjugating enzyme E2R 2 [Source:ZFIN;Acc:ZDB-GENE-040718-344]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92307
Orthologs(s)25 orthologs
Paralog(s)2 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
429
  • 429
98.57
  • 98.57
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.40e3
  • 3.40e3
88.62
  • 88.62
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
3.82e3
  • 3.82e3
  • 4.71e3
  • 8.92e3
  • 1.01e4
  • 1.01e4
87.22
  • 87.22
  • 84.24
  • 70.12
  • 66.22
  • 66.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
3.86e3
  • 3.86e3
87.07
  • 87.07
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
4.74e3
  • 4.74e3
  • 1.50e4
84.14
  • 84.14
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.02
  • 84.02
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.78e3
  • 4.78e3
  • 8.03e3
  • 1.04e4
  • 1.20e4
  • 1.33e4
84.01
  • 84.01
  • 73.11
  • 65.32
  • 59.96
  • 55.46
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.57e3
  • 5.57e3
81.35
  • 81.35
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.01e3
  • 6.01e3
79.87
  • 79.87
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.43
  • 79.43
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.80e3
  • 6.80e3
77.24
  • 77.24
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
76.56
  • 76.56
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
7.41e3
  • 7.41e3
  • 7.56e3
  • 9.05e3
  • 9.49e3
  • 1.04e4
  • 1.37e4
  • 1.55e4
75.20
  • 75.20
  • 74.69
  • 69.70
  • 68.23
  • 65.25
  • 53.96
  • 48.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
  • 7.64e3
75.05
  • 75.05
  • 74.40
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.22e3
  • 8.22e3
72.47
  • 72.47
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.76e3
  • 8.76e3
70.66
  • 70.66
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.77e3
  • 8.77e3
  • 1.54e4
70.65
  • 70.65
  • 48.36
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
8.90e3
  • 8.90e3
  • 9.25e3
70.20
  • 70.20
  • 69.05
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.16e3
  • 9.16e3
  • 1.34e4
  • 1.54e4
69.33
  • 69.33
  • 55.08
  • 48.51
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.87
  • 65.87
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000104life cycle
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000049segmentation
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.12e4
  • 1.12e4
  • 1.17e4
  • 1.35e4
  • 1.37e4
  • 1.39e4
  • 1.41e4
  • 1.42e4
  • 1.45e4
  • 1.47e4
  • 1.47e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.54e4
  • 1.54e4
62.38
  • 62.38
  • 60.80
  • 54.78
  • 54.11
  • 53.42
  • 52.91
  • 52.43
  • 51.34
  • 50.90
  • 50.80
  • 50.20
  • 50.08
  • 49.95
  • 48.53
  • 48.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.17e4
  • 1.17e4
60.83
  • 60.83
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.23e4
  • 1.23e4
58.83
  • 58.83
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.34e4
  • 1.34e4
55.16
  • 55.16
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species18 genesCompare expression
Bilateria24 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000058740.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058740.

Cross-references

EnsemblENSDARG00000058740 (ube2r2)
ZFINZDB-GENE-040718-344 (ube2r2)
EMBLBC075995, CU694487
Uniprot/SPTREMBLQ6DHH9, Q6DHH9_DANRE

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