D. rerio Gene: ubap1 - ENSDARG00000058746 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058746
Nameubap1
Descriptionubiquitin associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-950]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:56228
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.82e3
  • 3.82e3
87.21
  • 87.21
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
3.95e3
  • 3.95e3
  • 4.94e3
  • 6.05e3
  • 7.26e3
  • 7.27e3
86.78
  • 86.78
  • 83.46
  • 79.73
  • 75.68
  • 75.66
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.04e3
  • 4.04e3
86.47
  • 86.47
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.30e3
  • 4.30e3
85.62
  • 85.62
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.88
  • 84.88
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000109gastrula stage
  • UBERON:0000104life cycle
5.06e3
  • 5.06e3
  • 6.65e3
  • 7.55e3
  • 8.09e3
  • 8.10e3
  • 8.20e3
  • 8.75e3
  • 9.73e3
  • 1.00e4
  • 1.00e4
  • 1.01e4
  • 1.01e4
  • 1.05e4
  • 1.05e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
83.05
  • 83.05
  • 77.74
  • 74.74
  • 72.93
  • 72.87
  • 72.53
  • 70.69
  • 67.42
  • 66.46
  • 66.41
  • 66.22
  • 66.02
  • 65.01
  • 64.69
  • 50.25
  • 50.20
  • 49.99
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
  • 6.50e3
82.96
  • 82.96
  • 78.23
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.24e3
  • 5.24e3
82.46
  • 82.46
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
5.26e3
  • 5.26e3
  • 7.22e3
  • 7.54e3
  • 8.56e3
  • 8.81e3
  • 9.26e3
82.40
  • 82.40
  • 75.82
  • 74.76
  • 71.34
  • 70.49
  • 69.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.27
  • 82.27
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
5.58e3
  • 5.58e3
81.33
  • 81.33
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.63
  • 80.63
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.21e3
  • 6.21e3
  • 7.16e3
79.22
  • 79.22
  • 76.03
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.30e3
  • 6.30e3
  • 1.30e4
78.89
  • 78.89
  • 56.32
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.69
  • 76.69
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.96e3
  • 6.96e3
76.69
  • 76.69
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.00e3
  • 7.00e3
76.57
  • 76.57
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
7.18e3
  • 7.18e3
  • 9.72e3
75.95
  • 75.95
  • 67.45
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
7.42e3
  • 7.42e3
  • 7.66e3
  • 7.82e3
  • 8.18e3
  • 8.77e3
  • 1.05e4
  • 1.07e4
  • 1.12e4
  • 1.15e4
  • 1.18e4
75.17
  • 75.17
  • 74.34
  • 73.82
  • 72.63
  • 70.63
  • 64.69
  • 64.19
  • 62.50
  • 61.33
  • 60.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.26e3
  • 8.26e3
72.33
  • 72.33
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.10
  • 72.10
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
8.52e3
  • 8.52e3
  • 1.11e4
  • 1.13e4
71.46
  • 71.46
  • 62.70
  • 62.18
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
9.26e3
  • 9.26e3
  • 9.46e3
  • 1.03e4
  • 1.07e4
69.01
  • 69.01
  • 68.32
  • 65.59
  • 64.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.99e3
  • 9.99e3
66.55
  • 66.55
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.77
  • 65.77
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.54
  • 64.54
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.01
  • 64.01
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
1.14e4
  • 1.14e4
  • 1.16e4
  • 1.20e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
  • 1.25e4
  • 1.27e4
  • 1.29e4
  • 1.39e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
61.88
  • 61.88
  • 61.10
  • 59.98
  • 59.98
  • 58.80
  • 58.31
  • 58.31
  • 58.31
  • 57.47
  • 56.65
  • 53.31
  • 49.99
  • 49.99
  • 49.99
  • 49.99
  • 49.99
  • 49.99
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.25e4
  • 1.25e4
58.27
  • 58.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000058746 (ubap1)
ZFINZDB-GENE-040426-950 (ubap1)
Uniprot/SPTREMBLQ7ZV44, Q7ZV44_DANRE

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