D. rerio Gene: si:ch73-242m19.1 - ENSDARG00000058782 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058782
Namesi:ch73-242m19.1
Descriptionsi:ch73-242m19.1 [Source:ZFIN;Acc:ZDB-GENE-131121-474]
OrganismDanio rerio (zebrafish)
Orthologs(s)7 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.12
  • 51.12
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.72
  • 50.72
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.19
  • 44.19
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
35.97
  • 35.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.98e4
  • 1.98e4
  • 2.03e4
  • 2.10e4
  • 2.26e4
33.83
  • 33.83
  • 31.96
  • 29.76
  • 24.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.61
  • 30.61
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000058782 (si:ch73-242m19.1)
ZFINZDB-GENE-131121-474 (si:ch73-242m19.1)
Uniprot/SPTREMBLE7FC85, E7FC85_DANRE, X1WF00, X1WF00_DANRE

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