D. rerio Gene: zgc:171887 - ENSDARG00000058791 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058791
Namezgc:171887
Descriptionzgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
OrganismDanio rerio (zebrafish)
Paralog(s)39 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.26e4
  • 1.26e4
  • 1.49e4
57.89
  • 57.89
  • 50.10
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.33
  • 56.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.34e4
  • 1.34e4
55.12
  • 55.12
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.54
  • 51.54
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
  • 1.91e4
49.94
  • 49.94
  • 36.07
AEIR
  • AEIR
  • AEIR
UBERON:0000080mesonephros
  • UBERON:0000104life cycle
1.50e4
  • 1.50e4
49.92
  • 49.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.36
  • 48.36
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.01
  • 46.01
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.63e4
  • 1.63e4
  • 2.38e4
45.51
  • 45.51
  • 20.31
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.56
  • 42.56
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.31
  • 40.31
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
40.13
  • 40.13
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
  • 2.26e4
36.80
  • 36.80
  • 24.32
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.02
  • 33.02
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.53
  • 32.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.30
  • 32.30
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.27
  • 31.27
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
2.11e4
  • 2.11e4
  • 2.27e4
  • 2.43e4
  • 2.77e4
29.28
  • 29.28
  • 24.00
  • 18.52
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Otophysi39 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058791.

Cross-references

EnsemblENSDARG00000058791 (zgc:171887)
ZFINZDB-GENE-080220-39 (zgc:171887)
EMBLBX004840
Uniprot/SPTREMBLF1QC90, F1QC90_DANRE

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