D. rerio Gene: apoa1bp - ENSDARG00000058806 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058806
Nameapoa1bp
Descriptionapolipoprotein A-I binding protein [Source:ZFIN;Acc:ZDB-GENE-040718-362]
OrganismDanio rerio (zebrafish)
Synonym(s)aibp, aibp1, zgc:92263
Orthologs(s)10 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
3.09e3
  • 3.09e3
  • 1.50e4
89.64
  • 89.64
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.17e3
  • 3.17e3
89.40
  • 89.40
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.91e3
  • 3.91e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
4.12e3
  • 4.12e3
86.21
  • 86.21
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
85.98
  • 85.98
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.82
  • 85.82
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.25e3
  • 4.25e3
85.78
  • 85.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.86e3
  • 4.86e3
83.73
  • 83.73
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.09e3
  • 5.09e3
82.97
  • 82.97
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.91
  • 82.91
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.22e3
  • 5.22e3
  • 5.99e3
82.53
  • 82.53
  • 79.94
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.29e3
  • 5.29e3
82.28
  • 82.28
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
5.38e3
  • 5.38e3
  • 6.55e3
  • 7.37e3
  • 8.21e3
  • 1.08e4
82.00
  • 82.00
  • 78.06
  • 75.33
  • 72.53
  • 63.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
6.11e3
  • 6.11e3
79.53
  • 79.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.14e3
  • 6.14e3
  • 8.97e3
  • 9.87e3
79.44
  • 79.44
  • 69.96
  • 66.96
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.41e3
  • 6.41e3
78.53
  • 78.53
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
6.45e3
  • 6.45e3
  • 8.41e3
78.41
  • 78.41
  • 71.85
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
6.66e3
  • 6.66e3
  • 7.08e3
  • 7.54e3
  • 1.31e4
77.71
  • 77.71
  • 76.31
  • 74.75
  • 56.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.68e3
  • 6.68e3
77.63
  • 77.63
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
  • 1.14e4
77.43
  • 77.43
  • 61.95
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.49
  • 76.49
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
7.23e3
  • 7.23e3
  • 8.25e3
  • 9.46e3
  • 9.87e3
  • 9.88e3
  • 1.11e4
  • 1.15e4
  • 1.18e4
  • 1.25e4
  • 1.29e4
75.79
  • 75.79
  • 72.38
  • 68.34
  • 66.95
  • 66.94
  • 62.83
  • 61.62
  • 60.42
  • 57.98
  • 56.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
7.32e3
  • 7.32e3
  • 1.15e4
  • 1.26e4
  • 1.42e4
75.49
  • 75.49
  • 61.52
  • 57.76
  • 52.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
7.37e3
  • 7.37e3
  • 1.19e4
  • 1.49e4
75.32
  • 75.32
  • 60.16
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.74
  • 74.74
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
7.96e3
  • 7.96e3
  • 8.48e3
  • 8.91e3
  • 9.13e3
  • 9.80e3
  • 1.01e4
  • 1.09e4
  • 1.11e4
  • 1.11e4
  • 1.11e4
  • 1.16e4
  • 1.16e4
  • 1.18e4
  • 1.41e4
  • 1.44e4
73.34
  • 73.34
  • 71.62
  • 70.17
  • 69.43
  • 67.17
  • 66.29
  • 63.65
  • 62.98
  • 62.81
  • 62.78
  • 61.26
  • 61.20
  • 60.48
  • 52.87
  • 51.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.12e3
  • 8.12e3
72.83
  • 72.83
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.83e3
  • 9.83e3
67.09
  • 67.09
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.02e4
  • 1.02e4
65.79
  • 65.79
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.06e4
  • 1.06e4
64.45
  • 64.45
AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
1.32e4
  • 1.32e4
55.82
  • 55.82
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Eukaryota1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000058806.

Cross-references

EnsemblENSDARG00000058806 (apoa1bp)
ZFINZDB-GENE-040718-362 (apoa1bp)
EMBLBC075969, BX890617
Uniprot/SWISSPROTNNRE_DANRE, Q6DHK1

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