D. rerio Gene: zdhhc3b - ENSDARG00000058830 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058830
Namezdhhc3b
Descriptionzinc finger, DHHC-type containing 3b [Source:ZFIN;Acc:ZDB-GENE-061110-19]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:154029
Paralog(s)3 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.38e3
  • 6.38e3
  • 6.77e3
78.63
  • 78.63
  • 77.32
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.76e3
  • 7.76e3
74.02
  • 74.02
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
7.97e3
  • 7.97e3
  • 1.03e4
  • 1.17e4
  • 1.29e4
  • 1.42e4
73.31
  • 73.31
  • 65.55
  • 60.92
  • 56.90
  • 52.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.43e3
  • 8.43e3
71.77
  • 71.77
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.79e3
  • 8.79e3
  • 9.97e3
70.56
  • 70.56
  • 66.62
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
9.13e3
  • 9.13e3
69.45
  • 69.45
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.27e3
  • 9.27e3
  • 1.16e4
68.95
  • 68.95
  • 61.31
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
9.56e3
  • 9.56e3
67.98
  • 67.98
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.25
  • 67.25
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.42
  • 63.42
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.67
  • 62.67
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.83
  • 61.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.22
  • 61.22
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.03
  • 61.03
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.17e4
  • 1.17e4
60.73
  • 60.73
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.88
  • 59.88
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.21e4
  • 1.21e4
59.48
  • 59.48
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.32e4
  • 1.32e4
  • 1.54e4
55.90
  • 55.90
  • 48.55
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
  • 1.68e4
54.08
  • 54.08
  • 43.88
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.78
  • 53.78
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.12
  • 52.12
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.53
  • 50.53
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.87
  • 46.87
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.49
  • 45.49
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Vertebrata2 genesCompare expression
Opisthokonta3 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058830.

Cross-references

EnsemblENSDARG00000058830 (zdhhc3b)
ZFINZDB-GENE-061110-19 (zdhhc3b)
EMBLBC127404, BC165382, CABZ01092338
Uniprot/SPTREMBLA0JPF8, A0JPF8_DANRE

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