D. rerio Gene: ttc29 - ENSDARG00000058885 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058885
Namettc29
Descriptiontetratricopeptide repeat domain 29 [Source:ZFIN;Acc:ZDB-GENE-100922-181]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch211-256m12.5
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
940
  • 940
96.86
  • 96.86
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.67
  • 56.67
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.63e4
  • 1.63e4
45.27
  • 45.27
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.09
  • 45.09
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.65
  • 40.65
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
1.81e4
  • 1.81e4
  • 1.99e4
  • 2.22e4
39.54
  • 39.54
  • 33.41
  • 25.81
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.39
  • 37.39
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.99
  • 36.99
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.68
  • 35.68
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.37
  • 32.37
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.32
  • 32.32
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
2.05e4
  • 2.05e4
31.44
  • 31.44
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.06e4
  • 2.06e4
30.96
  • 30.96
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e4
  • 2.07e4
30.68
  • 30.68
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.34
  • 29.34
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.26e4
  • 2.26e4
24.26
  • 24.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000058885 (ttc29)
ZFINZDB-GENE-100922-181 (ttc29)
EMBLBX927222, CR385082
Uniprot/SPTREMBLE9QCZ1, E9QCZ1_DANRE, F1QVS7, F1QVS7_DANRE

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