D. rerio Gene: cldn10a - ENSDARG00000058937 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058937
Namecldn10a
Descriptionclaudin 10a [Source:ZFIN;Acc:ZDB-GENE-030616-510]
OrganismDanio rerio (zebrafish)
Synonym(s)cldn10, cldn10 {eco:0000313|embl:aai63751.1,gn eco:0000313|zfin:zdb-gene-030616-510}, dz52i16.3, si:busm1-52i16.3, si:dz52i16.3
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
57.88
  • 57.88
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.72
  • 57.72
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.58e4
  • 1.58e4
47.22
  • 47.22
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.85
  • 36.85
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.61
  • 36.61
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
1.96e4
  • 1.96e4
  • 2.18e4
  • 2.20e4
34.44
  • 34.44
  • 26.91
  • 26.27
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
33.95
  • 33.95
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.07
  • 33.07
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.08e4
  • 2.08e4
  • 2.47e4
30.48
  • 30.48
  • 17.44
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.27e4
  • 2.27e4
  • 2.38e4
24.01
  • 24.01
  • 20.34
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.27
  • 23.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Neopterygii1 geneCompare expression
Chordata11 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000058937.

Cross-references

EnsemblENSDARG00000058937 (cldn10a)
ZFINZDB-GENE-030616-510 (cldn10a)
EMBLAL591370, BC163751, BX663606
Uniprot/SPTREMBLQ8QHA3, Q8QHA3_DANRE

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