D. rerio Gene: cdcp1a - ENSDARG00000058943 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000058943
Namecdcp1a
DescriptionCUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:113071
Orthologs(s)19 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
3.96e3
  • 3.96e3
  • 4.08e3
86.76
  • 86.76
  • 86.34
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
5.42e3
  • 5.42e3
  • 6.25e3
81.86
  • 81.86
  • 79.08
AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.76e3
  • 5.76e3
80.71
  • 80.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.57e3
  • 8.57e3
71.32
  • 71.32
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.23e3
  • 9.23e3
69.10
  • 69.10
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.42e3
  • 9.42e3
68.45
  • 68.45
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.57e3
  • 9.57e3
67.94
  • 67.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.96e3
  • 9.96e3
66.64
  • 66.64
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.06
  • 61.06
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.04
  • 61.04
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.75
  • 60.75
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.30e4
  • 1.30e4
  • 1.44e4
  • 1.62e4
  • 1.84e4
  • 1.92e4
56.35
  • 56.35
  • 51.84
  • 45.76
  • 38.24
  • 35.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.41
  • 55.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.34
  • 50.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.16
  • 49.16
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.55e4
  • 1.55e4
  • 1.67e4
48.25
  • 48.25
  • 44.02
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.27
  • 44.27
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.58
  • 42.58
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.74e4
  • 1.74e4
  • 1.92e4
41.79
  • 41.79
  • 35.80
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.75e4
  • 1.75e4
  • 1.95e4
41.46
  • 41.46
  • 34.63
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.77e4
  • 1.77e4
40.85
  • 40.85
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
37.06
  • 37.06
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
34.97
  • 34.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.19
  • 33.19
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000058943 (cdcp1a)
ZFINZDB-GENE-050327-55 (cdcp1a)
EMBLCU467885
Uniprot/SPTREMBLF8W2E4, F8W2E4_DANRE

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