Gene: si:dkey-288i20.1 - ENSDARG00000058945 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000058945
Name	si:dkey-288i20.1
Description	si:dkey-288i20.1 [Source:ZFIN;Acc:ZDB-GENE-110407-17]
Organism	Danio rerio (zebrafish)
Orthologs(s)	54 orthologs
Paralog(s)	8 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	615 615	97.94 97.94	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	1.48e3 1.48e3	95.04 95.04	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.59e3 1.59e3	94.68 94.68	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.66e3 1.66e3	94.44 94.44	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.27e4 1.27e4	57.45 57.45	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	1.34e4 1.34e4	55.25 55.25	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.55 46.55	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.53 46.53	AEIR AEIR
UBERON:0000033	head	[+] 1 stage UBERON:0000066fully formed stage	1.60e4 1.60e4	46.28 46.28	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	50 genes ENSG00000119673 ACOT2 ENSG00000177465 ACOT4 ENSG00000184227 ACOT1 ENSMUSG00000021226 Acot2 ENSMUSG00000021228 Acot3 ENSMUSG00000042540 Acot5 ENSMUSG00000043487 Acot6 ENSMUSG00000052392 Acot4 ENSMUSG00000072949 Acot1 ENSPTRG00000006516 ACOT1 ENSPTRG00000006518 ACOT4 ENSGGOG00000001567 ACOT4 ENSGGOG00000015023 ENSGGOG00000027166 ENSMMUG00000006855 ENSMMUG00000006856 ACOT4 ENSRNOG00000010134 Acot2 ENSRNOG00000029637 Acot6 ENSRNOG00000032508 Acot5 ENSRNOG00000046864 Acot4 ENSRNOG00000053460 Acot3 ENSRNOG00000055221 Acot1 ENSBTAG00000002843 ENSBTAG00000009788 ACOT6 ENSBTAG00000010270 ENSBTAG00000046814 ENSSSCG00000002348 ACOT6 ENSSSCG00000002349 ACOT4 ENSECAG00000009756 ENSECAG00000015948 ACOT4 ENSECAG00000016290 ACOT6 ENSOCUG00000006009 ENSOCUG00000006012 ENSOCUG00000022214 ENSOCUG00000022543 ENSOCUG00000023109 ENSCAFG00000016848 ENSCAFG00000023467 ACOT6 ENSCAFG00000023593 ACOT4 ENSFCAG00000008139 ACOT4 ENSCPOG00000004485 ENSEEUG00000004298 ACOT4 ENSEEUG00000007843 ENSOANG00000001051 ENSOANG00000001052 ENSGALG00000008752 ENSGALG00000009292 ENSACAG00000016077 ENSXETG00000000057 acot2 ENSXETG00000030267	Compare expression	[+]
Bilateria	19 species Homo sapiens (human) Mus musculus (mouse) Caenorhabditis elegans (nematode) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	54 genes ENSG00000119673 ACOT2 ENSG00000177465 ACOT4 ENSG00000184227 ACOT1 ENSMUSG00000021226 Acot2 ENSMUSG00000021228 Acot3 ENSMUSG00000042540 Acot5 ENSMUSG00000043487 Acot6 ENSMUSG00000052392 Acot4 ENSMUSG00000072949 Acot1 WBGene00007857 C31H5.6 WBGene00019404 K05B2.4 WBGene00020258 T05E7.1 WBGene00020989 W03D8.8 ENSPTRG00000006516 ACOT1 ENSPTRG00000006518 ACOT4 ENSGGOG00000001567 ACOT4 ENSGGOG00000015023 ENSGGOG00000027166 ENSMMUG00000006855 ENSMMUG00000006856 ACOT4 ENSRNOG00000010134 Acot2 ENSRNOG00000029637 Acot6 ENSRNOG00000032508 Acot5 ENSRNOG00000046864 Acot4 ENSRNOG00000053460 Acot3 ENSRNOG00000055221 Acot1 ENSBTAG00000002843 ENSBTAG00000009788 ACOT6 ENSBTAG00000010270 ENSBTAG00000046814 ENSSSCG00000002348 ACOT6 ENSSSCG00000002349 ACOT4 ENSECAG00000009756 ENSECAG00000015948 ACOT4 ENSECAG00000016290 ACOT6 ENSOCUG00000006009 ENSOCUG00000006012 ENSOCUG00000022214 ENSOCUG00000022543 ENSOCUG00000023109 ENSCAFG00000016848 ENSCAFG00000023467 ACOT6 ENSCAFG00000023593 ACOT4 ENSFCAG00000008139 ACOT4 ENSCPOG00000004485 ENSEEUG00000004298 ACOT4 ENSEEUG00000007843 ENSOANG00000001051 ENSOANG00000001052 ENSGALG00000008752 ENSGALG00000009292 ENSACAG00000016077 ENSXETG00000000057 acot2 ENSXETG00000030267	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000058945.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Otophysi	2 genes ENSDARG00000042510 si:dkey-11e23.4 ENSDARG00000042513 si:dkey-11e23.3	Compare expression	[+]
Chordata	8 genes ENSDARG00000033413 si:dkey-183c16.7 ENSDARG00000040427 zgc:101553 ENSDARG00000042510 si:dkey-11e23.4 ENSDARG00000042513 si:dkey-11e23.3 ENSDARG00000045522 si:dkeyp-89c11.3 ENSDARG00000069292 si:dkeyp-89c11.1 ENSDARG00000088524 zgc:77651 ENSDARG00000089159 si:dkeyp-89c11.2	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000058945.

Cross-references

Ensembl	ENSDARG00000058945 (si:dkey-288i20.1)
ZFIN	ZDB-GENE-110407-17 (si:dkey-288i20.1)
EMBL	CU467885
Uniprot/SPTREMBL	F6NRN3, F6NRN3_DANRE