D. rerio Gene: lim2.2 - ENSDARG00000059015 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059015
Namelim2.2
Descriptionlens intrinsic membrane protein 2.2 [Source:ZFIN;Acc:ZDB-GENE-060124-1]
OrganismDanio rerio (zebrafish)
Synonym(s)mp19-2
Orthologs(s)1 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.11e3
  • 2.11e3
92.95
  • 92.95
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.78e3
  • 3.78e3
  • 1.17e4
87.33
  • 87.33
  • 60.86
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.48
  • 83.48
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.33e3
  • 8.33e3
72.11
  • 72.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.06e4
  • 1.06e4
64.43
  • 64.43
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.28
  • 64.28
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.29
  • 62.29
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.14e4
  • 1.14e4
  • 1.60e4
61.99
  • 61.99
  • 46.33
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
  • 1.79e4
59.72
  • 59.72
  • 40.15
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.38
  • 59.38
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.24e4
  • 1.24e4
  • 1.55e4
58.43
  • 58.43
  • 48.02
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.68
  • 48.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.63e4
  • 1.63e4
  • 1.72e4
  • 1.78e4
  • 2.04e4
  • 2.04e4
45.32
  • 45.32
  • 42.48
  • 40.42
  • 31.79
  • 31.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.69e4
  • 1.69e4
43.32
  • 43.32
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
1.75e4
  • 1.75e4
41.25
  • 41.25
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.89
  • 40.89
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.62
  • 36.62
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.28e4
  • 2.28e4
23.53
  • 23.53
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.50
  • 21.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000059015.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata2 genesCompare expression
Eumetazoa4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059015.

Cross-references

EnsemblENSDARG00000059015 (lim2.2)
ZFINZDB-GENE-060124-1 (lim2.2)
EMBLBC122426, CABZ01084805, CABZ01084806, DQ118396
Uniprot/SPTREMBLQ45RH2, Q45RH2_DANRE

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