D. rerio Gene: slc13a4 - ENSDARG00000059053 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059053
Nameslc13a4
Descriptionsolute carrier family 13 (sodium/sulfate symporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-71]
OrganismDanio rerio (zebrafish)
Synonym(s)e7f9f9, zgc:162495
Orthologs(s)19 orthologs
Paralog(s)5 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
652
  • 652
  • 2.34e3
97.82
  • 97.82
  • 92.17
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.49e3
  • 1.49e3
  • 2.59e3
  • 3.32e3
  • 7.85e3
  • 1.13e4
95.02
  • 95.02
  • 91.35
  • 88.88
  • 73.71
  • 62.17
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.24e3
  • 2.24e3
  • 6.63e3
92.52
  • 92.52
  • 77.79
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.90e3
  • 6.90e3
  • 7.81e3
76.90
  • 76.90
  • 73.84
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.02e3
  • 7.02e3
76.48
  • 76.48
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
7.10e3
  • 7.10e3
76.22
  • 76.22
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.62
  • 52.62
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.56e4
  • 1.56e4
47.80
  • 47.80
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.34
  • 44.34
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.89
  • 42.89
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.53
  • 40.53
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.01e4
  • 2.01e4
32.56
  • 32.56
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota5 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059053.

Cross-references

EnsemblENSDARG00000059053 (slc13a4)
ZFINZDB-GENE-070424-71 (slc13a4)
EMBLBX546489
Uniprot/SPTREMBLB8A5J0, B8A5J0_DANRE, F1R5V0, F1R5V0_DANRE

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