D. rerio Gene: rassf3 - ENSDARG00000059064 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059064
Namerassf3
DescriptionRas association (RalGDS/AF-6) domain family member 3 [Source:ZFIN;Acc:ZDB-GENE-100422-9]
OrganismDanio rerio (zebrafish)
Orthologs(s)18 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.08e3
  • 1.08e3
96.39
  • 96.39
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.44e3
  • 1.44e3
  • 4.05e3
95.19
  • 95.19
  • 86.44
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.98e3
  • 1.98e3
93.39
  • 93.39
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
2.31e3
  • 2.31e3
92.26
  • 92.26
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.41e3
  • 2.41e3
91.95
  • 91.95
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.53e3
  • 2.53e3
91.54
  • 91.54
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
3.41e3
  • 3.41e3
88.59
  • 88.59
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
3.57e3
  • 3.57e3
  • 5.05e3
88.04
  • 88.04
  • 83.09
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
3.65e3
  • 3.65e3
  • 5.00e3
  • 5.42e3
  • 5.67e3
  • 8.25e3
87.80
  • 87.80
  • 83.25
  • 81.85
  • 81.01
  • 72.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.69
  • 86.69
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.30
  • 86.30
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.37
  • 85.37
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.98e3
  • 4.98e3
83.34
  • 83.34
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.89e3
  • 5.89e3
80.29
  • 80.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.93e3
  • 5.93e3
80.16
  • 80.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
5.95e3
  • 5.95e3
80.08
  • 80.08
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
6.11e3
  • 6.11e3
  • 6.39e3
79.54
  • 79.54
  • 78.59
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.13e3
  • 6.13e3
79.49
  • 79.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.37e3
  • 6.37e3
78.67
  • 78.67
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.77e3
  • 6.77e3
  • 8.08e3
77.32
  • 77.32
  • 72.94
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
6.82e3
  • 6.82e3
77.17
  • 77.17
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.83e3
  • 6.83e3
  • 1.00e4
77.12
  • 77.12
  • 66.48
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
63.54
  • 63.54
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
50.96
  • 50.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Cross-references

EnsemblENSDARG00000059064 (rassf3)
ZFINZDB-GENE-100422-9 (rassf3)
EMBLFP102892, FP236161
Uniprot/SPTREMBLE7FDU1, E7FDU1_DANRE, X1WHA5, X1WHA5_DANRE

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