D. rerio Gene: SLC22A13 - ENSDARG00000059166 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000059166
NameSLC22A13
Descriptionzgc:153639 [Source:ZFIN;Acc:ZDB-GENE-061013-532]
OrganismDanio rerio (zebrafish)
Synonym(s)oat10, octl1, octl3, orctl3, si:dkey-178a21.2, wu:fj86d12
Orthologs(s)22 orthologs
Paralog(s)21 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.88
  • 90.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.76
  • 84.76
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.37e3
  • 5.37e3
82.03
  • 82.03
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.73e3
  • 7.73e3
74.11
  • 74.11
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
8.83e3
  • 8.83e3
70.45
  • 70.45
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.35
  • 64.35
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.24e4
  • 1.24e4
  • 1.81e4
  • 1.84e4
  • 1.92e4
  • 2.12e4
58.61
  • 58.61
  • 39.54
  • 38.32
  • 35.84
  • 29.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.48
  • 58.48
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.27e4
  • 1.27e4
57.51
  • 57.51
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.39
  • 54.39
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.48e4
  • 1.48e4
50.52
  • 50.52
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.90
  • 48.90
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.45
  • 47.45
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.68e4
  • 1.68e4
43.75
  • 43.75
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
1.78e4
  • 1.78e4
40.54
  • 40.54
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.78e4
  • 1.78e4
40.53
  • 40.53
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.81e4
  • 1.81e4
  • 2.02e4
39.35
  • 39.35
  • 32.29
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.14
  • 36.14
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.19
  • 34.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.79
  • 27.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta21 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000059166.

Cross-references

EnsemblENSDARG00000059166 (SLC22A13)
HGNCHGNC:8494 (SLC22A13)
ZFINZDB-GENE-061013-532 (zgc:153639)
Uniprot/SPTREMBLE7FCW8, E7FCW8_DANRE

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