Gene: glmp - ENSDARG00000059354 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000059354
Name	glmp
Description	glycosylated lysosomal membrane protein [Source:ZFIN;Acc:ZDB-GENE-040912-142]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:92308
Orthologs(s)	17 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.44e3 1.44e3	95.19 95.19	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	2.58e3 2.58e3	91.38 91.38	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	2.79e3 2.79e3	90.65 90.65	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	3.16e3 3.16e3	89.43 89.43	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	3.18e3 3.18e3	89.34 89.34	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	3.48e3 3.48e3	88.34 88.34	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	3.87e3 3.87e3	87.04 87.04	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	4.11e3 4.11e3	86.24 86.24	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	4.65e3 4.65e3 6.39e3	84.43 84.43 78.61	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	5.08e3 5.08e3 8.60e3	83.01 83.01 71.20	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	5.10e3 5.10e3	82.92 82.92	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	5.17e3 5.17e3	82.68 82.68	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	5.27e3 5.27e3 5.72e3	82.34 82.34 80.84	AEIR AEIR AEIR
UBERON:0000992	female gonad	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	5.43e3 5.43e3 1.45e4	81.82 81.82 51.36	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	5.84e3 5.84e3	80.44 80.44	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	5.96e3 5.96e3	80.03 80.03	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	6.24e3 6.24e3	79.11 79.11	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	6.54e3 6.54e3	78.11 78.11	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	6.60e3 6.60e3 8.93e3	77.91 77.91 70.08	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000037Larval:Day 5 ZFS:0000029Pharyngula:Prim-5 UBERON:0000068embryo stage ZFS:0000033Hatching:Long-pec	6.88e3 6.88e3 6.89e3 7.03e3 9.09e3 9.39e3	76.97 76.97 76.93 76.47 69.55 68.57	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	6.96e3 6.96e3	76.71 76.71	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	7.52e3 7.52e3	74.82 74.82	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	7.72e3 7.72e3	74.16 74.16	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.83e3 7.83e3 1.06e4	73.77 73.77 64.50	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	8.93e3 8.93e3	70.08 70.08	AEIR AEIR
UBERON:0000966	retina	[+] 1 stage ZFS:0000037Larval:Day 5	9.30e3 9.30e3	68.87 68.87	AEIR AEIR
UBERON:0000468	multi-cellular organism	[+] 5 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage UBERON:0000068embryo stage ZFS:0000049segmentation UBERON:0000104life cycle	1.28e4 1.28e4 1.45e4 1.49e4 1.49e4 1.50e4	57.18 57.18 51.56 50.20 49.95 49.92	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000019	camera-type eye	[+] 1 stage ZFS:0000035Larval:Protruding-mouth	1.34e4 1.34e4	55.16 55.16	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	17 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Monodelphis domestica (opossum) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	17 genes ENSG00000198715 GLMP ENSMUSG00000001418 Glmp ENSPTRG00000001455 GLMP ENSGGOG00000014243 GLMP ENSMMUG00000000092 GLMP ENSRNOG00000019281 Glmp ENSBTAG00000006364 GLMP ENSSSCG00000006488 GLMP ENSECAG00000024928 GLMP ENSOCUG00000026609 GLMP ENSCAFG00000016835 GLMP ENSFCAG00000011788 GLMP ENSCPOG00000004976 GLMP ENSMODG00000016888 GLMP ENSGALG00000028969 GLMP ENSACAG00000013034 GLMP ENSXETG00000034121 GLMP	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000059354.

Cross-references

Ensembl	ENSDARG00000059354 (glmp)
ZFIN	ZDB-GENE-040912-142 (glmp)
EMBL	BC081645, CR391989
Uniprot/SWISSPROT	GLMP_DANRE, Q66HW4